Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 RNU6-921P-201ENST00000384361 107 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 RNA5SP91-201ENST00000390902 119 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AL953862.1-201ENST00000423016 168 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC093698.1-201ENST00000423843 571 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 VN1R54P-201ENST00000435210 1049 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 RPL12P46-201ENST00000436610 195 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 MTCO2P16-201ENST00000436962 677 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC105402.2-201ENST00000438503 358 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 ATP5C1P1-201ENST00000441945 895 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 CEACAMP7-201ENST00000444105 496 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 COX6CP2-201ENST00000444980 225 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AL445669.2-201ENST00000454425 421 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC116337.2-201ENST00000477662 156 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 RPL7AP6-201ENST00000477943 801 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC090013.1-201ENST00000485147 480 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 NPM1P6-201ENST00000521088 871 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 MIR4716-201ENST00000579628 84 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 SNORD39.3-201ENST00000584451 71 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC092354.1-201ENST00000606057 376 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AL445222.1-201ENST00000607259 628 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC024560.3-201ENST00000608482 349 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC018816.2-201ENST00000621460 353 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AC135068.5-201ENST00000624197 983 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 SMG1P4-204ENST00000523028 4131 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 AL031119.1-201ENST00000404707 1879 ntBASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHGA3Q9Y5H0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 MTCO1P14-201ENST00000441695 1559 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AL390237.1-201ENST00000404226 1415 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC006210.2-201ENST00000367074 1545 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 RNU1-136P-201ENST00000384181 164 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 SNORA67-201ENST00000384423 137 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AL009179.1-201ENST00000406085 265 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AL023807.1-201ENST00000407932 359 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC083875.1-201ENST00000419509 405 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AL158073.1-201ENST00000426848 1104 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC010153.1-201ENST00000432862 727 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 BMS1P19-201ENST00000433925 393 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 YWHAZP8-201ENST00000436935 731 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AL360221.1-201ENST00000445989 335 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 CBX1P2-201ENST00000453841 458 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC092757.1-201ENST00000467293 467 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 OR4G11P-201ENST00000492842 939 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 SNRPCP2-201ENST00000504370 475 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 MTND4P2-201ENST00000507767 1203 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC018797.3-201ENST00000513388 1241 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms