Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RNU1-55P-201ENST00000365510 158 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 PARD3-204ENST00000374768 799 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AL121834.1-202ENST00000404494 277 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 RN7SKP86-201ENST00000410454 332 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 MTCYBP10-201ENST00000424905 650 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 RPL7L1P10-201ENST00000427790 463 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 HMGB3P11-201ENST00000440127 604 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AL121578.2-201ENST00000448797 447 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AC106872.2-201ENST00000494303 480 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AC023818.1-201ENST00000498379 384 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 RPL39P5-202ENST00000512505 151 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 PRMT5P1-201ENST00000514351 598 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 RNU6-1088P-201ENST00000516850 104 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 RN7SKP295-201ENST00000517264 153 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AC103843.2-201ENST00000530523 682 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AC140063.1-201ENST00000541343 259 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AC053481.3-201ENST00000577881 843 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 CYCSP1-201ENST00000604815 315 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AL592436.1-201ENST00000605135 558 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AL513218.1-201ENST00000606527 391 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 CDC27P2-201ENST00000425026 1922 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AC093278.2-201ENST00000564956 2485 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AC097714.1-201ENST00000511272 1647 ntBASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHB11Q9Y5F2 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 SNORA70.3-201ENST00000365075 132 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 RNU6-1207P-201ENST00000384343 107 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 UBBP1-201ENST00000392399 473 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 DSTNP4-201ENST00000399472 474 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 MIR1282-201ENST00000408865 101 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 RNU6-985P-201ENST00000410182 104 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 RN7SKP247-201ENST00000411094 308 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 TIMM9P1-201ENST00000436122 256 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 AC108734.1-201ENST00000439549 399 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 ELOCP24-201ENST00000456370 334 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 RPS29P15-201ENST00000458329 171 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 UBFD1P1-201ENST00000473259 814 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 AC063943.2-201ENST00000495697 534 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 AC018797.3-201ENST00000513388 1241 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 AP000889.2-201ENST00000532684 490 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 RN7SL270P-201ENST00000579643 281 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 ELL2P4-201ENST00000446870 1376 ntBASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB11Q9Y5F2 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms