Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL137100.1-201ENST00000556703 1620 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AL512430.2-201ENST00000406786 339 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 LINC01881-201ENST00000416103 412 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AC006960.1-201ENST00000419980 153 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 PTP4A1P5-201ENST00000420305 455 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AL358176.3-201ENST00000420757 454 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AC234781.2-201ENST00000426370 994 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 MTND1P32-201ENST00000433043 938 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AC234064.1-201ENST00000436312 247 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 ARL4AP3-201ENST00000441452 574 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AL929288.2-201ENST00000446368 407 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 TPT1P12-201ENST00000448968 492 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 MRPL42P4-201ENST00000453267 443 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 RN7SL354P-201ENST00000469282 294 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 MTND1P22-201ENST00000510572 951 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 RNA5SP360-201ENST00000516555 118 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 RN7SL690P-201ENST00000582087 240 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 MIR5096-201ENST00000583713 70 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AC068790.7-201ENST00000602347 528 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AC068790.2-201ENST00000602601 557 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AC025165.5-201ENST00000602802 578 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AC015914.2-201ENST00000618167 288 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AL157770.1-201ENST00000623049 439 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 OR51H2P-202ENST00000641424 3046 ntBASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 NEAT1-202ENST00000501122 22743 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 AC005332.5-201ENST00000591222 2919 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 OR4K15-201ENST00000305051 1216 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 RNU6-1339P-201ENST00000363574 91 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 MIR320B1-201ENST00000390209 79 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 AC004074.1-201ENST00000421810 1063 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 C4BPAP2-201ENST00000428434 478 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 AC005154.2-201ENST00000438110 379 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 GSTA7P-201ENST00000438425 448 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 TXNP5-201ENST00000441043 315 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 MTND5P2-201ENST00000442927 1142 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 snoU13.1-201ENST00000459157 104 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 RPL23AP56-201ENST00000460778 453 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 RPL7P48-201ENST00000461513 746 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 AC011979.1-201ENST00000472300 483 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 RN7SKP46-201ENST00000515942 234 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 RN7SKP92-201ENST00000517266 244 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 AC044913.1-201ENST00000557200 430 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 MIR3912-201ENST00000577566 105 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 EIF1P6-201ENST00000600054 334 ntBASIC5.23□□□□□ -1.57
SSX2IPQ9Y2D8 BNIP3P4-201ENST00000604946 565 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms