Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AC079097.1-201ENST00000512187 1399 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 Y_RNA.263-201ENST00000364659 114 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 SUGT1P1-201ENST00000379514 476 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 RNA5SP187-201ENST00000384400 119 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 RNU6-1122P-201ENST00000384449 107 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 RNA5SP122-201ENST00000384457 108 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 SNORD116-23-201ENST00000384645 92 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 NPM1P38-201ENST00000403835 865 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 USP9YP27-201ENST00000418455 438 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AL035660.1-201ENST00000422041 222 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 CACYBPP1-201ENST00000438592 684 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 RPL5P25-201ENST00000441148 775 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 MTCO3P20-201ENST00000454926 688 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 RPL38P1-201ENST00000460914 211 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AC092757.1-201ENST00000467293 467 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 ACTR3P3-201ENST00000480448 893 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AC091544.1-201ENST00000484702 348 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 DUTP1-201ENST00000493631 470 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AC012170.1-201ENST00000495139 359 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 NDUFA5P12-201ENST00000503796 343 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 MTND5P4-201ENST00000514978 288 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 FAM92A1P1-201ENST00000528023 890 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 ZNF322P1-201ENST00000568013 1209 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AL391840.1-201ENST00000571144 367 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 MTCO3P13-201ENST00000577757 781 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AC009977.1-201ENST00000586015 570 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 BNIP3P23-201ENST00000599655 511 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AC073091.2-201ENST00000603205 907 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AC112191.3-201ENST00000604371 277 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 AL139286.1-201ENST00000604465 483 ntBASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
SEC61A2Q9H9S3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.6
SEC61A2Q9H9S3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
SEC61A2Q9H9S3 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.09□□□□□ -1.6
SEC61A2Q9H9S3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SEC61A2Q9H9S3 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AL034546.1-201ENST00000623740 3693 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 Y_RNA.25-201ENST00000362528 102 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 RNU4-73P-201ENST00000363164 141 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 U3.10-201ENST00000364459 214 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 RNU6-809P-201ENST00000384461 107 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 TMSB4XP8-201ENST00000402089 135 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AL356776.1-201ENST00000406574 447 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 NACAP7-201ENST00000407371 609 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AL357752.1-201ENST00000412817 349 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 EEF1A1P40-201ENST00000412883 573 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 TMSB4XP6-201ENST00000415187 135 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 TMSB4XP1-201ENST00000424567 135 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AC008850.1-201ENST00000427546 362 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 GAPDHP48-201ENST00000436626 961 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AC007677.1-201ENST00000445757 515 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 GAPDHP17-201ENST00000449858 1001 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AC108463.1-201ENST00000450258 347 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms