Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 AC107016.1-201ENST00000550463 337 ntBASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 RN7SL339P-201ENST00000580597 296 ntBASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 MIR4298-201ENST00000584380 73 ntBASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 AL135786.2-201ENST00000608422 615 ntBASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 AC039056.2-201ENST00000622261 511 ntBASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 OR11H5P-202ENST00000641612 1325 ntBASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.61□□□□□ -1.67
UPF3BQ9BZI7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 OR13C3-201ENST00000374781 1108 ntBASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 MIR634-201ENST00000385208 97 ntBASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 AL450992.3-201ENST00000413192 568 ntBASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 RAC1P3-201ENST00000416129 580 ntBASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 VN1R31P-201ENST00000417498 730 ntBASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 Z74696.2-201ENST00000436514 498 ntBASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 RAB9AP5-201ENST00000437794 597 ntBASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 RAB9AP2-201ENST00000443911 597 ntBASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 AP000619.3-201ENST00000535634 1127 ntBASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 AC025946.2-201ENST00000603398 234 ntBASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 BRDTP1-201ENST00000605735 677 ntBASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 HMGB1P50-201ENST00000605814 607 ntBASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 AC019176.2-201ENST00000611579 315 ntBASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
UPF3BQ9BZI7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 MIR3074-201ENST00000384885 81 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 AL590704.1-201ENST00000402856 794 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 RN7SKP56-201ENST00000410513 331 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 TCEA1P4-201ENST00000415066 844 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 Z97055.1-201ENST00000419730 712 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 IFNNP1-201ENST00000429219 553 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 HMGB1P16-201ENST00000447155 540 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 TRBV12-2-201ENST00000489763 344 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 NCAPGP1-201ENST00000505112 1814 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 VTA1P2-201ENST00000520205 911 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 OR4A12P-201ENST00000530847 918 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 NPM1P47-201ENST00000560843 856 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 SRGNP1-201ENST00000603392 451 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 AL139286.1-201ENST00000604465 483 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 AC023813.4-201ENST00000607580 580 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 AL139089.1-201ENST00000620372 975 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 AC079684.1-201ENST00000621405 437 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 ATE1-AS1-202ENST00000636460 506 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 MIR6715B-201ENST00000637172 77 ntBASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
UPF3BQ9BZI7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
UPF3BQ9BZI7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
UPF3BQ9BZI7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.68
UPF3BQ9BZI7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 AC134882.1-201ENST00000603738 1676 ntBASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 HMGN2P8-201ENST00000391458 268 ntBASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 AC099063.2-201ENST00000446360 662 ntBASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.58□□□□□ -1.68
UPF3BQ9BZI7 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms