Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AL096803.2-201ENST00000450032 677 ntBASIC5.44□□□□□ -1.54
SALL3Q9BXA9 MRPL42P4-201ENST00000453267 443 ntBASIC5.44□□□□□ -1.54
SALL3Q9BXA9 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.44□□□□□ -1.54
SALL3Q9BXA9 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 AC005008.1-201ENST00000456151 612 ntBASIC5.44□□□□□ -1.54
SALL3Q9BXA9 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 RPS29P33-201ENST00000456717 146 ntBASIC5.44□□□□□ -1.54
SALL3Q9BXA9 AL133477.1-201ENST00000457472 514 ntBASIC5.44□□□□□ -1.54
SALL3Q9BXA9 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 AC107015.1-201ENST00000466902 747 ntBASIC5.44□□□□□ -1.54
SALL3Q9BXA9 AC108022.1-201ENST00000493466 478 ntBASIC5.44□□□□□ -1.54
SALL3Q9BXA9 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 AC134698.4-201ENST00000523451 826 ntBASIC5.44□□□□□ -1.54
SALL3Q9BXA9 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 AL354976.1-201ENST00000613843 387 ntBASIC5.44□□□□□ -1.54
SALL3Q9BXA9 MIR6810-201ENST00000622701 70 ntBASIC5.44□□□□□ -1.54
SALL3Q9BXA9 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.44□□□□□ -1.54
SALL3Q9BXA9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 Y_RNA.77-201ENST00000362962 107 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 RNA5SP22-201ENST00000365393 109 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 SNORA56-201ENST00000383966 129 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 U6.112-201ENST00000384129 70 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 SNORD65-201ENST00000391079 73 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 MTCO1P56-201ENST00000401674 224 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 AC002524.1-201ENST00000411687 547 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 CEACAMP8-201ENST00000413902 580 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 TMSB10P2-201ENST00000416049 131 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 AL807761.1-201ENST00000417622 171 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 BTF3P9-201ENST00000418784 283 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 PNRC2P1-201ENST00000423940 420 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 RPL12P18-201ENST00000437175 325 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 SEPT14P24-201ENST00000447236 180 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 CYCSP42-201ENST00000450823 238 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 RPL7AP10-201ENST00000481016 791 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 RPL23AP72-201ENST00000492447 435 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 ARL4AP1-201ENST00000503220 705 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 AC008837.1-201ENST00000511513 412 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 MTND3P5-201ENST00000512798 333 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 AC100770.1-201ENST00000532310 322 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 AC006518.2-201ENST00000542513 940 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 RPL12P25-202ENST00000598100 674 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 AP002906.1-201ENST00000603405 233 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 AC124312.4-201ENST00000605533 310 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 OR2AS2P-201ENST00000606902 342 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 AC006065.6-201ENST00000625201 545 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 AC084035.1-201ENST00000634543 607 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 BX005019.1-201ENST00000561881 1810 ntBASIC5.43□□□□□ -1.54
SALL3Q9BXA9 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.43□□□□□ -1.54
SALL3Q9BXA9 AC012618.3-205ENST00000637896 1496 ntBASIC5.42□□□□□ -1.54
SALL3Q9BXA9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.42□□□□□ -1.54
SALL3Q9BXA9 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SALL3Q9BXA9 ZNF849P-201ENST00000594711 1566 ntBASIC5.42□□□□□ -1.54
SALL3Q9BXA9 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.42□□□□□ -1.54
SALL3Q9BXA9 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SALL3Q9BXA9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SALL3Q9BXA9 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.42□□□□□ -1.54
SALL3Q9BXA9 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SALL3Q9BXA9 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms