Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 TRIM51DP-201ENST00000529746 596 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AP002373.2-201ENST00000541631 1060 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC123904.3-201ENST00000547218 814 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC008687.2-201ENST00000597865 520 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AL360012.1-201ENST00000602813 131 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC073091.2-201ENST00000603205 907 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AL359999.1-201ENST00000604513 294 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AL009028.1-201ENST00000604895 802 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 SNORA11.6-201ENST00000619030 128 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AL136221.1-201ENST00000621449 509 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AL445264.1-201ENST00000621719 171 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC130304.1-201ENST00000622942 2385 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 NLRP3P1-201ENST00000622303 1785 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AL121839.2-201ENST00000565058 6943 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 AC022031.1-201ENST00000585985 2593 ntBASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PTCHD1Q96NR3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 OR11H5P-202ENST00000641612 1325 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AC091305.2-201ENST00000624049 1576 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 OR52B3P-201ENST00000314715 928 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 RNU1-150P-201ENST00000362491 162 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 SNORD1C-201ENST00000363315 78 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 GNG5P2-201ENST00000372054 207 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 RNU6-116P-201ENST00000384042 109 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 RNU6-483P-201ENST00000384088 108 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 SNORD115.1-201ENST00000391109 76 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 MRPS21P2-201ENST00000424704 264 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AC010881.1-201ENST00000433830 235 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AC023347.2-201ENST00000433994 462 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 BX679664.2-201ENST00000439282 283 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 C1DP4-201ENST00000455429 424 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 RNU1-88P-201ENST00000459274 128 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 MTND1P3-201ENST00000484956 952 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 OR5M14P-201ENST00000506803 618 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 LRRC34P2-201ENST00000514850 553 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 RNU6-488P-201ENST00000515918 99 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 Y_RNA.693-201ENST00000516641 110 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 MIR2117-201ENST00000516780 80 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 PMS2P3-207ENST00000529061 717 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AP003122.4-201ENST00000530980 758 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AL512310.1-201ENST00000548639 172 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AL389895.1-201ENST00000554127 252 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AL049779.3-201ENST00000557141 606 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AL157394.1-201ENST00000562983 1224 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 MIR4310-201ENST00000582950 57 ntBASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.51□□□□□ -1.53
PTCHD1Q96NR3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms