Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AL451044.1-201ENST00000604867 238 ntBASIC3.32□□□□□ -1.88
USP9XQ93008 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
USP9XQ93008 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC3.32□□□□□ -1.88
USP9XQ93008 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
USP9XQ93008 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
USP9XQ93008 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
USP9XQ93008 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP9XQ93008 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.31□□□□□ -1.88
USP9XQ93008 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
USP9XQ93008 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
USP9XQ93008 RNU4-35P-201ENST00000362588 141 ntBASIC3.31□□□□□ -1.88
USP9XQ93008 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.31□□□□□ -1.88
USP9XQ93008 SNRPCP3-201ENST00000474888 476 ntBASIC3.31□□□□□ -1.88
USP9XQ93008 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP9XQ93008 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.31□□□□□ -1.88
USP9XQ93008 AL137790.1-201ENST00000634283 177 ntBASIC3.31□□□□□ -1.88
USP9XQ93008 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.31□□□□□ -1.88
USP9XQ93008 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
USP9XQ93008 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.31□□□□□ -1.88
USP9XQ93008 AC139426.3-201ENST00000605648 2059 ntBASIC3.31□□□□□ -1.88
USP9XQ93008 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USP9XQ93008 AL365440.1-201ENST00000436135 2167 ntBASIC3.31□□□□□ -1.88
USP9XQ93008 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP9XQ93008 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP9XQ93008 RAP1BP1-201ENST00000412709 553 ntBASIC3.31□□□□□ -1.88
USP9XQ93008 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.31□□□□□ -1.88
USP9XQ93008 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.31□□□□□ -1.88
USP9XQ93008 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.31□□□□□ -1.88
USP9XQ93008 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.31□□□□□ -1.88
USP9XQ93008 RNU7-143P-201ENST00000516781 65 ntBASIC3.31□□□□□ -1.88
USP9XQ93008 AL162274.2-201ENST00000614406 332 ntBASIC3.31□□□□□ -1.88
USP9XQ93008 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.31□□□□□ -1.88
USP9XQ93008 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP9XQ93008 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USP9XQ93008 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC3.31□□□□□ -1.88
USP9XQ93008 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.3□□□□□ -1.88
USP9XQ93008 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.3□□□□□ -1.88
USP9XQ93008 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
USP9XQ93008 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
USP9XQ93008 RPL7P60-201ENST00000397636 735 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 RPS26P4-201ENST00000431743 355 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 AC005019.1-201ENST00000436455 431 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 BTF3P5-201ENST00000457252 467 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 AC006511.1-201ENST00000470614 315 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 AC093663.1-201ENST00000497190 394 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.3□□□□□ -1.88
USP9XQ93008 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC3.3□□□□□ -1.88
USP9XQ93008 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC3.3□□□□□ -1.88
USP9XQ93008 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.3□□□□□ -1.88
USP9XQ93008 AC125494.3-201ENST00000602759 455 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 IGHV3-29-201ENST00000604817 344 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.3□□□□□ -1.88
USP9XQ93008 HSPD1P14-201ENST00000432666 1618 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP9XQ93008 AC007823.1-201ENST00000569932 1566 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
USP9XQ93008 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.3□□□□□ -1.88
USP9XQ93008 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.3□□□□□ -1.88
USP9XQ93008 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
USP9XQ93008 MIR199A2-201ENST00000385289 110 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 AL024507.1-201ENST00000412741 274 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.3□□□□□ -1.88
USP9XQ93008 AC017079.2-201ENST00000416102 485 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.3□□□□□ -1.88
USP9XQ93008 BX890604.2-201ENST00000427883 474 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.3□□□□□ -1.88
USP9XQ93008 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC3.3□□□□□ -1.88
USP9XQ93008 AC103843.2-201ENST00000530523 682 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.3□□□□□ -1.88
USP9XQ93008 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
USP9XQ93008 AC025627.2-201ENST00000576220 160 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.3□□□□□ -1.88
USP9XQ93008 AP003392.5-201ENST00000607857 415 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 AC093732.2-201ENST00000607950 274 ntBASIC3.3□□□□□ -1.88
USP9XQ93008 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
USP9XQ93008 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
USP9XQ93008 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP9XQ93008 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
USP9XQ93008 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP9XQ93008 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
USP9XQ93008 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.3□□□□□ -1.88
USP9XQ93008 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.29□□□□□ -1.88
USP9XQ93008 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
USP9XQ93008 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.29□□□□□ -1.88
USP9XQ93008 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
USP9XQ93008 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC3.29□□□□□ -1.88
USP9XQ93008 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.29□□□□□ -1.88
USP9XQ93008 RPL31P50-201ENST00000471002 296 ntBASIC3.29□□□□□ -1.88
USP9XQ93008 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.29□□□□□ -1.88
USP9XQ93008 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.29□□□□□ -1.88
USP9XQ93008 AC027216.1-201ENST00000577726 685 ntBASIC3.29□□□□□ -1.88
USP9XQ93008 AC026368.1-201ENST00000614934 690 ntBASIC3.29□□□□□ -1.88
USP9XQ93008 RNA5SP439-201ENST00000617595 124 ntBASIC3.29□□□□□ -1.88
USP9XQ93008 AL136360.1-201ENST00000503377 1900 ntBASIC3.29□□□□□ -1.88
USP9XQ93008 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
USP9XQ93008 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
USP9XQ93008 RNA5SP235-201ENST00000365411 114 ntBASIC3.29□□□□□ -1.88
USP9XQ93008 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC3.29□□□□□ -1.88
USP9XQ93008 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms