Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRAF3IP1Q8TDR0 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.44□□□□□ -1.7
TRAF3IP1Q8TDR0 AL109766.1-201ENST00000555080 552 ntBASIC4.44□□□□□ -1.7
TRAF3IP1Q8TDR0 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.44□□□□□ -1.7
TRAF3IP1Q8TDR0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.44□□□□□ -1.7
TRAF3IP1Q8TDR0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.44□□□□□ -1.7
TRAF3IP1Q8TDR0 MTATP6P2-201ENST00000603319 678 ntBASIC4.44□□□□□ -1.7
TRAF3IP1Q8TDR0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRAF3IP1Q8TDR0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRAF3IP1Q8TDR0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRAF3IP1Q8TDR0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.44□□□□□ -1.7
TRAF3IP1Q8TDR0 AC007390.2-201ENST00000606229 3803 ntBASIC4.44□□□□□ -1.7
TRAF3IP1Q8TDR0 AC104446.1-201ENST00000613728 1321 ntBASIC4.44□□□□□ -1.7
TRAF3IP1Q8TDR0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRAF3IP1Q8TDR0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRAF3IP1Q8TDR0 AC119744.1-201ENST00000454746 1715 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 SNORA63.3-201ENST00000362682 132 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 RNU6-1339P-201ENST00000363574 91 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 MIR3074-201ENST00000384885 81 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 MIR192-201ENST00000384915 110 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 MIR1179-201ENST00000408703 91 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 RNA5SP104-201ENST00000410989 118 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 RPL23AP52-201ENST00000439311 478 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AL138878.2-201ENST00000440581 1241 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AL512326.1-201ENST00000443050 721 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AL096829.2-201ENST00000446582 742 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 GTF2IP12-201ENST00000456547 356 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 RN7SL98P-201ENST00000462271 300 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 RN7SL810P-201ENST00000493031 276 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AC104164.2-201ENST00000496953 495 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 HMGN1P15-201ENST00000513870 295 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AC007424.1-203ENST00000554613 687 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AC095057.3-201ENST00000567102 1157 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AC078899.5-201ENST00000612475 178 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AC243756.2-201ENST00000618406 463 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AP000943.4-201ENST00000622912 357 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AP002371.2-201ENST00000624450 503 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 AC046144.1-201ENST00000478559 1853 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.43□□□□□ -1.7
TRAF3IP1Q8TDR0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 MTND4P26-201ENST00000415971 1359 ntBASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 AC103591.2-201ENST00000265259 766 ntBASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 CNOT7P1-201ENST00000429006 852 ntBASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 AC023347.2-201ENST00000433994 462 ntBASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 AC006994.1-201ENST00000438212 839 ntBASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 AC009263.1-201ENST00000441193 1239 ntBASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 NDUFA12P1-201ENST00000455914 406 ntBASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.42□□□□□ -1.7
TRAF3IP1Q8TDR0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms