Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 FAM3C2-201ENST00000312214 681 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 RN7SKP56-201ENST00000410513 331 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 RNU2-37P-201ENST00000410695 177 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 HSPE1P12-201ENST00000412576 301 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 AL159169.1-201ENST00000421119 127 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 RPL23AP38-201ENST00000423801 469 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 AC115285.1-201ENST00000424879 736 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 HMGB3P5-201ENST00000428894 612 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 PPIAP17-201ENST00000438507 471 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 CYCSP42-201ENST00000450823 238 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 AC069499.1-201ENST00000489433 509 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 RN7SL604P-201ENST00000492589 296 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 AP004242.1-201ENST00000533701 349 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 AC022968.1-201ENST00000567372 442 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 MIR5096-201ENST00000583713 70 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 IPO5P1-202ENST00000600039 287 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 RNA5SP108-201ENST00000605921 117 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 AC007342.8-201ENST00000623278 678 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 OR5AC4P-202ENST00000642086 985 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 SEPT7P7-201ENST00000420492 1301 ntBASIC3.84□□□□□ -1.79
CLHC1Q8NHS4 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CLHC1Q8NHS4 NMD3P1-201ENST00000439704 1488 ntBASIC3.84□□□□□ -1.8
CLHC1Q8NHS4 FAM35DP-201ENST00000323387 2712 ntBASIC3.84□□□□□ -1.8
CLHC1Q8NHS4 CCT8P1-201ENST00000413611 1657 ntBASIC3.84□□□□□ -1.8
CLHC1Q8NHS4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CLHC1Q8NHS4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CLHC1Q8NHS4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.84□□□□□ -1.8
CLHC1Q8NHS4 ZNF33CP-201ENST00000432492 2030 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 OR11H4-201ENST00000315409 1082 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 RNU6-328P-201ENST00000390887 106 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 AC004987.3-201ENST00000413879 771 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 AL592293.2-201ENST00000422292 996 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 DNAJC19P7-201ENST00000428811 344 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 RPS24P8-201ENST00000431490 402 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 OR6C71P-201ENST00000432580 913 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 ELOCP11-201ENST00000436690 332 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 RPS7P5-201ENST00000441482 581 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 MTCO3P17-201ENST00000443775 513 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 ELOCP16-201ENST00000444494 332 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 UQCRHP4-201ENST00000471686 272 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 AC023141.12-201ENST00000512399 199 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 AC026726.1-201ENST00000512859 601 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 ACTR6P1-201ENST00000514311 1104 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 AC034244.2-201ENST00000514668 858 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 HIGD1AP18-201ENST00000520730 278 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 AL360157.1-201ENST00000565962 87 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 AC015911.5-201ENST00000587076 451 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 MIR6748-201ENST00000610433 71 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 AC006065.5-201ENST00000623427 349 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 MIR3653-201ENST00000625572 110 ntBASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
CLHC1Q8NHS4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 AL133383.2-201ENST00000622958 2336 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 AF127577.6-201ENST00000623352 2191 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 AC087565.3-202ENST00000642085 1603 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 AC005261.4-201ENST00000600047 1385 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms