Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 AL359715.4-201ENST00000606629 1436 ntBASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC50Q8IVM0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 AC005261.4-201ENST00000600047 1385 ntBASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 RNU6-666P-201ENST00000363499 107 ntBASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 RNU6-304P-201ENST00000364855 107 ntBASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 RNU11-4P-201ENST00000391149 133 ntBASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 MTND3P4-201ENST00000453537 303 ntBASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 RPL21P71-201ENST00000465598 459 ntBASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 S100A11P1-201ENST00000477525 312 ntBASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 RN7SL271P-201ENST00000487601 295 ntBASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 AC090543.1-201ENST00000492168 485 ntBASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 AC009643.1-201ENST00000532030 391 ntBASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 AC008083.2-201ENST00000546707 476 ntBASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 AC012414.2-201ENST00000559474 187 ntBASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 EIF1P6-201ENST00000600054 334 ntBASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 AL133247.2-201ENST00000603236 482 ntBASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 PSMA6P4-201ENST00000603247 718 ntBASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 MIR3653-201ENST00000625572 110 ntBASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 CCT8P1-201ENST00000413611 1657 ntBASIC4.19□□□□□ -1.74
CCDC50Q8IVM0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 SNORA27.3-201ENST00000364937 134 ntBASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 AC108032.1-201ENST00000416706 207 ntBASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 RPL7P53-201ENST00000421245 739 ntBASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 AL592293.2-201ENST00000422292 996 ntBASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 AC245028.1-201ENST00000423259 256 ntBASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 AC023141.6-201ENST00000429418 337 ntBASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 MTCYBP12-201ENST00000440559 1134 ntBASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 AC105137.1-201ENST00000484355 562 ntBASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 HMGB3P14-201ENST00000494195 599 ntBASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 AC106806.2-201ENST00000509365 500 ntBASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 AC093770.1-201ENST00000511559 571 ntBASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 RNU6-760P-201ENST00000516078 97 ntBASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 MIR5096-201ENST00000583713 70 ntBASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 MIR7151-201ENST00000617477 60 ntBASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 AC104820.1-201ENST00000624183 307 ntBASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 AC010329.2-201ENST00000595195 2737 ntBASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 IPO8P1-201ENST00000455509 3109 ntBASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
CCDC50Q8IVM0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 EXOC5P1-201ENST00000510543 1969 ntBASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 AL021368.2-201ENST00000606125 5352 ntBASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms