Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.46□□□□□ -1.86
LRRC28Q86X40 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.46□□□□□ -1.86
LRRC28Q86X40 AC116667.1-201ENST00000604855 2072 ntBASIC3.46□□□□□ -1.86
LRRC28Q86X40 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LRRC28Q86X40 USP8P1-201ENST00000494673 3183 ntBASIC3.46□□□□□ -1.86
LRRC28Q86X40 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC28Q86X40 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC28Q86X40 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC28Q86X40 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC28Q86X40 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC28Q86X40 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC28Q86X40 SPRR2C-201ENST00000290702 219 ntBASIC3.45□□□□□ -1.86
LRRC28Q86X40 SNORA60-201ENST00000362396 134 ntBASIC3.45□□□□□ -1.86
LRRC28Q86X40 RNA5SP130-201ENST00000364431 114 ntBASIC3.45□□□□□ -1.86
LRRC28Q86X40 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.45□□□□□ -1.86
LRRC28Q86X40 RNU11-4P-201ENST00000391149 133 ntBASIC3.45□□□□□ -1.86
LRRC28Q86X40 MIR1193-201ENST00000408109 78 ntBASIC3.45□□□□□ -1.86
LRRC28Q86X40 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.45□□□□□ -1.86
LRRC28Q86X40 AC010740.1-201ENST00000417035 684 ntBASIC3.45□□□□□ -1.86
LRRC28Q86X40 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.45□□□□□ -1.86
LRRC28Q86X40 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC28Q86X40 AC002075.2-201ENST00000425207 252 ntBASIC3.45□□□□□ -1.86
LRRC28Q86X40 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.45□□□□□ -1.86
LRRC28Q86X40 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.45□□□□□ -1.86
LRRC28Q86X40 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.45□□□□□ -1.86
LRRC28Q86X40 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC28Q86X40 AL132838.2-201ENST00000492041 314 ntBASIC3.45□□□□□ -1.86
LRRC28Q86X40 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.45□□□□□ -1.86
LRRC28Q86X40 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.45□□□□□ -1.86
LRRC28Q86X40 RN7SKP209-201ENST00000516888 304 ntBASIC3.45□□□□□ -1.86
LRRC28Q86X40 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.45□□□□□ -1.86
LRRC28Q86X40 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.45□□□□□ -1.86
LRRC28Q86X40 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.45□□□□□ -1.86
LRRC28Q86X40 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.45□□□□□ -1.86
LRRC28Q86X40 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.45□□□□□ -1.86
LRRC28Q86X40 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.45□□□□□ -1.86
LRRC28Q86X40 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC28Q86X40 OR8R1P-201ENST00000543943 764 ntBASIC3.45□□□□□ -1.86
LRRC28Q86X40 AC105036.1-201ENST00000566222 271 ntBASIC3.45□□□□□ -1.86
LRRC28Q86X40 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.45□□□□□ -1.86
LRRC28Q86X40 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.45□□□□□ -1.86
LRRC28Q86X40 AC090953.1-201ENST00000604305 1092 ntBASIC3.45□□□□□ -1.86
LRRC28Q86X40 AC067959.1-201ENST00000604334 379 ntBASIC3.45□□□□□ -1.86
LRRC28Q86X40 AL139089.1-201ENST00000620372 975 ntBASIC3.45□□□□□ -1.86
LRRC28Q86X40 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.45□□□□□ -1.86
LRRC28Q86X40 ATE1-AS1-202ENST00000636460 506 ntBASIC3.45□□□□□ -1.86
LRRC28Q86X40 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
LRRC28Q86X40 AC100871.1-201ENST00000507871 1456 ntBASIC3.45□□□□□ -1.86
LRRC28Q86X40 AC010329.2-201ENST00000595195 2737 ntBASIC3.45□□□□□ -1.86
LRRC28Q86X40 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.45□□□□□ -1.86
LRRC28Q86X40 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LRRC28Q86X40 AC090229.1-201ENST00000590983 1609 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.44□□□□□ -1.86
LRRC28Q86X40 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRC28Q86X40 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRC28Q86X40 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
LRRC28Q86X40 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRC28Q86X40 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.44□□□□□ -1.86
LRRC28Q86X40 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
LRRC28Q86X40 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
LRRC28Q86X40 RNA5SP515-201ENST00000364570 118 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 SNORD6-201ENST00000365444 73 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 OR8G2P-201ENST00000412796 908 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 RPL7AP73-201ENST00000413490 353 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 AC009237.5-201ENST00000414271 501 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LRRC28Q86X40 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LRRC28Q86X40 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRC28Q86X40 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.44□□□□□ -1.86
LRRC28Q86X40 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRC28Q86X40 AL356276.2-201ENST00000435919 558 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 FCF1P7-201ENST00000451185 558 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 HMGB3P21-201ENST00000452483 547 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 AC005229.2-201ENST00000456995 399 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 RPL23AP62-201ENST00000463396 453 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRC28Q86X40 IGKV2-23-201ENST00000518729 323 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 AC008802.1-201ENST00000519121 791 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.44□□□□□ -1.86
LRRC28Q86X40 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRC28Q86X40 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.44□□□□□ -1.86
LRRC28Q86X40 AL121839.1-201ENST00000556233 1185 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 CYP2C60P-201ENST00000566088 139 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 AC025627.2-201ENST00000576220 160 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.44□□□□□ -1.86
LRRC28Q86X40 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRC28Q86X40 MIR5684-201ENST00000585074 65 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.44□□□□□ -1.86
LRRC28Q86X40 AC005255.1-201ENST00000593748 216 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 AL049844.2-201ENST00000604280 628 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 AL592295.2-201ENST00000612578 206 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 MIR7151-201ENST00000617477 60 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 OR6C71P-202ENST00000641886 1107 ntBASIC3.44□□□□□ -1.86
LRRC28Q86X40 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
LRRC28Q86X40 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRC28Q86X40 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
LRRC28Q86X40 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRC28Q86X40 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRC28Q86X40 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRC28Q86X40 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms