Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC099669.2-201ENST00000616549 437 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AC004825.2-201ENST00000616634 455 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AL359715.5-201ENST00000623431 443 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 AC092162.3-201ENST00000624511 1624 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 DCAF13P3-201ENST00000561147 1334 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 RNU1-15P-201ENST00000353977 144 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 ZNF603P-201ENST00000405613 487 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 RPL7P28-201ENST00000437739 740 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 RAD1P2-201ENST00000446414 663 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 RPS26P15-201ENST00000488067 348 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 OR5H4P-201ENST00000510851 923 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 HMGB1P47-201ENST00000511281 589 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 OR5M7P-201ENST00000526140 972 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 OR4A2P-201ENST00000527276 913 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 AC107016.1-201ENST00000550463 337 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 AC063950.1-201ENST00000552036 308 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 AC027176.2-201ENST00000559166 746 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 AC023158.1-201ENST00000561632 1025 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 AC010680.4-201ENST00000605334 543 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 AC099676.1-201ENST00000608886 657 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 AC138393.1-206ENST00000540997 1886 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 ERCC6-202ENST00000374127 1782 ntBASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.81□□□□□ -1.8
H3F3CQ6NXT2 MTCO1P14-201ENST00000441695 1559 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 SAGE2P-201ENST00000420011 2126 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 SNORA60-201ENST00000362396 134 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 RNU1-87P-201ENST00000363727 170 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 RPL32P23-201ENST00000397237 405 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 MTND2P11-201ENST00000423638 648 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 OR8F1P-201ENST00000425243 930 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AL031736.2-201ENST00000426573 787 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AP002345.1-201ENST00000456493 928 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 RPL36AP13-201ENST00000457490 317 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AC012170.1-201ENST00000495139 359 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 RPL30P11-201ENST00000495304 339 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 MTATP6P22-201ENST00000507369 598 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AC010285.3-201ENST00000511668 676 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 FTH1P21-201ENST00000512179 511 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 RNU6-491P-201ENST00000516099 110 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AC074029.2-201ENST00000551045 634 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AL049870.4-201ENST00000555741 486 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AP001180.3-201ENST00000582221 145 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AC053481.4-201ENST00000583164 216 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 MIR7702-201ENST00000621931 59 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms