Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 OR8I1P-201ENST00000529291 931 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 AC092747.2-201ENST00000545069 983 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 AC119674.1-212ENST00000641155 993 ntBASIC2.38□□□□□ -2.03
VPS13DQ5THJ4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 VN1R8P-201ENST00000407739 893 ntBASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 FTH1P11-201ENST00000517577 551 ntBASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 DUXAP6-201ENST00000553858 601 ntBASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 AC034105.3-201ENST00000565294 442 ntBASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 AL773545.4-201ENST00000637262 310 ntBASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 AL392088.2-201ENST00000637607 285 ntBASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 AL513478.4-201ENST00000641636 310 ntBASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 UBE3AP2-201ENST00000429033 2259 ntBASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 RNU1-108P-201ENST00000362556 161 ntBASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 AC096644.3-201ENST00000416788 338 ntBASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 RPL21P6-201ENST00000479171 504 ntBASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 AC119744.1-201ENST00000454746 1715 ntBASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 RNU6-301P-201ENST00000384277 107 ntBASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 Z99755.1-201ENST00000414048 380 ntBASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 RPL21P11-201ENST00000461458 483 ntBASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 PPBPP1-201ENST00000510807 373 ntBASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 AC027281.1-201ENST00000574178 758 ntBASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 MIR6715A-201ENST00000615929 79 ntBASIC2.37□□□□□ -2.03
VPS13DQ5THJ4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 RNA5SP197-201ENST00000363357 119 ntBASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 GSTM3P2-201ENST00000412746 530 ntBASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 AC006480.1-201ENST00000449887 378 ntBASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 AC108022.1-201ENST00000493466 478 ntBASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 STMN1P2-201ENST00000508435 439 ntBASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 Vault.1-201ENST00000516474 102 ntBASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 RPL7AP73-201ENST00000413490 353 ntBASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 GNG5P5-201ENST00000420444 220 ntBASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 AC011825.1-201ENST00000484967 388 ntBASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 AC068020.1-201ENST00000594215 661 ntBASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 AC013412.1-201ENST00000610687 192 ntBASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 AL451142.2-201ENST00000429076 2090 ntBASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 RNA5SP146-201ENST00000410743 123 ntBASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 AC008638.3-201ENST00000603341 463 ntBASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 AC100793.4-201ENST00000613683 429 ntBASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 AC244517.3-201ENST00000616254 1235 ntBASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms