Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AL669831.5-218ENST00000591702 1873 ntBASIC3.19□□□□□ -1.9
LRRK2Q5S007 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRK2Q5S007 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 RN7SKP97-201ENST00000410966 333 ntBASIC3.19□□□□□ -1.9
LRRK2Q5S007 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 AP002884.2-201ENST00000471647 395 ntBASIC3.19□□□□□ -1.9
LRRK2Q5S007 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 AC109925.1-201ENST00000478069 331 ntBASIC3.19□□□□□ -1.9
LRRK2Q5S007 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 AP001207.2-201ENST00000519490 539 ntBASIC3.19□□□□□ -1.9
LRRK2Q5S007 ATP5F1P5-201ENST00000526403 760 ntBASIC3.19□□□□□ -1.9
LRRK2Q5S007 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 AC084759.1-201ENST00000561168 290 ntBASIC3.19□□□□□ -1.9
LRRK2Q5S007 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 AP000553.6-201ENST00000641242 118 ntBASIC3.19□□□□□ -1.9
LRRK2Q5S007 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
LRRK2Q5S007 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
LRRK2Q5S007 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.18□□□□□ -1.9
LRRK2Q5S007 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRK2Q5S007 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRK2Q5S007 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LRRK2Q5S007 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRK2Q5S007 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRK2Q5S007 RPL5P18-201ENST00000406671 891 ntBASIC3.18□□□□□ -1.9
LRRK2Q5S007 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.18□□□□□ -1.9
LRRK2Q5S007 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRK2Q5S007 RPS23P10-201ENST00000416185 486 ntBASIC3.18□□□□□ -1.9
LRRK2Q5S007 OR2AH1P-201ENST00000425717 928 ntBASIC3.18□□□□□ -1.9
LRRK2Q5S007 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRK2Q5S007 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRK2Q5S007 RPS17P13-201ENST00000448974 407 ntBASIC3.18□□□□□ -1.9
LRRK2Q5S007 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRK2Q5S007 YWHAEP4-201ENST00000505390 198 ntBASIC3.18□□□□□ -1.9
LRRK2Q5S007 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LRRK2Q5S007 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRK2Q5S007 LARP7P3-201ENST00000579888 337 ntBASIC3.18□□□□□ -1.9
LRRK2Q5S007 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRK2Q5S007 MIR7851-201ENST00000610611 160 ntBASIC3.18□□□□□ -1.9
LRRK2Q5S007 RNA5SP439-201ENST00000617595 124 ntBASIC3.18□□□□□ -1.9
LRRK2Q5S007 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.18□□□□□ -1.9
LRRK2Q5S007 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRK2Q5S007 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LRRK2Q5S007 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRK2Q5S007 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LRRK2Q5S007 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
LRRK2Q5S007 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRK2Q5S007 GVINP1-202ENST00000531871 7271 ntBASIC3.18□□□□□ -1.9
LRRK2Q5S007 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LRRK2Q5S007 SNORA5B-201ENST00000363786 132 ntBASIC3.18□□□□□ -1.9
LRRK2Q5S007 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRK2Q5S007 VDAC1P9-201ENST00000412766 841 ntBASIC3.18□□□□□ -1.9
LRRK2Q5S007 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRK2Q5S007 RPL7P24-201ENST00000493052 752 ntBASIC3.18□□□□□ -1.9
LRRK2Q5S007 HMGB3P16-201ENST00000508037 287 ntBASIC3.18□□□□□ -1.9
LRRK2Q5S007 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRK2Q5S007 AC063950.1-201ENST00000552036 308 ntBASIC3.18□□□□□ -1.9
LRRK2Q5S007 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRK2Q5S007 AC068254.2-201ENST00000623938 3577 ntBASIC3.17□□□□□ -1.9
LRRK2Q5S007 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRK2Q5S007 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 AC092376.2-201ENST00000622621 4116 ntBASIC3.17□□□□□ -1.9
LRRK2Q5S007 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRK2Q5S007 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.17□□□□□ -1.9
LRRK2Q5S007 SNORD17-201ENST00000390930 237 ntBASIC3.17□□□□□ -1.9
LRRK2Q5S007 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 TPTE2P3-201ENST00000441562 1189 ntBASIC3.17□□□□□ -1.9
LRRK2Q5S007 AC113192.3-201ENST00000529152 742 ntBASIC3.17□□□□□ -1.9
LRRK2Q5S007 MIR3162-201ENST00000581818 82 ntBASIC3.17□□□□□ -1.9
LRRK2Q5S007 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 AL137790.1-201ENST00000634283 177 ntBASIC3.17□□□□□ -1.9
LRRK2Q5S007 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 ZNF807-201ENST00000328088 1707 ntBASIC3.17□□□□□ -1.9
LRRK2Q5S007 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LRRK2Q5S007 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRK2Q5S007 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRK2Q5S007 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRK2Q5S007 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRK2Q5S007 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 RNU6-304P-201ENST00000364855 107 ntBASIC3.17□□□□□ -1.9
LRRK2Q5S007 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 AL138885.1-201ENST00000405921 675 ntBASIC3.17□□□□□ -1.9
LRRK2Q5S007 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 BX842559.1-201ENST00000419615 532 ntBASIC3.17□□□□□ -1.9
LRRK2Q5S007 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 PRELID3BP10-201ENST00000431957 584 ntBASIC3.17□□□□□ -1.9
LRRK2Q5S007 RPL21P110-201ENST00000433345 446 ntBASIC3.17□□□□□ -1.9
LRRK2Q5S007 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms