Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 MIR591-201ENST00000385290 95 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 SNORA48.8-201ENST00000391324 134 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 AC092642.1-201ENST00000392417 425 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 AL161909.1-201ENST00000397390 712 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 ELOCP19-201ENST00000411919 318 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 AL590139.1-201ENST00000416267 400 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 AC069213.2-201ENST00000420238 366 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 NANOGP10-201ENST00000453325 895 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 RN7SL826P-201ENST00000479724 288 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 AC021146.5-201ENST00000503544 545 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 RN7SKP83-201ENST00000516512 178 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 AC109635.6-201ENST00000525487 1113 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 CYCSP29-201ENST00000533731 318 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 PSMB7P1-201ENST00000556349 514 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 AC211433.2-201ENST00000608433 387 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 SRP72P2-201ENST00000344851 1979 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.44□□□□□ -1.86
CCDC58Q4VC31 RNA5SP399-201ENST00000364003 117 ntBASIC3.44□□□□□ -1.86
CCDC58Q4VC31 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AL590806.1-201ENST00000415818 853 ntBASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AC108032.1-201ENST00000416706 207 ntBASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AC010740.1-201ENST00000417035 684 ntBASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AL590762.4-201ENST00000425885 253 ntBASIC3.44□□□□□ -1.86
CCDC58Q4VC31 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 CYCSP43-201ENST00000438233 310 ntBASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 RNU6-1218P-201ENST00000458990 108 ntBASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AC074386.1-201ENST00000476560 767 ntBASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AC092185.1-201ENST00000491371 97 ntBASIC3.44□□□□□ -1.86
CCDC58Q4VC31 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 RN7SKP60-201ENST00000516985 239 ntBASIC3.44□□□□□ -1.86
CCDC58Q4VC31 TRAV37-201ENST00000553906 342 ntBASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 FAM106CP-201ENST00000582212 507 ntBASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AC006116.5-201ENST00000591936 559 ntBASIC3.44□□□□□ -1.86
CCDC58Q4VC31 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AL139041.1-201ENST00000605480 610 ntBASIC3.44□□□□□ -1.86
CCDC58Q4VC31 SNORA51-201ENST00000606420 132 ntBASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 PLCE1P1-201ENST00000622094 305 ntBASIC3.44□□□□□ -1.86
CCDC58Q4VC31 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC58Q4VC31 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC58Q4VC31 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC58Q4VC31 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC58Q4VC31 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC58Q4VC31 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC58Q4VC31 RNA5SP443-201ENST00000363083 132 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 RNA5SP447-201ENST00000363749 119 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CCDC58Q4VC31 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC58Q4VC31 HSPE1P26-201ENST00000405341 275 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 RPL31P52-201ENST00000407532 367 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC58Q4VC31 OR5BE1P-201ENST00000425977 939 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 CNOT7P1-201ENST00000429006 852 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 RPL21P11-201ENST00000461458 483 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 RPL6P9-201ENST00000466502 859 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 RN7SL303P-201ENST00000469773 251 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 AC041039.1-201ENST00000485656 536 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms