Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 RNU1-75P-201ENST00000347264 129 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 SNORA73.2-201ENST00000364946 201 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 SNORA70C-201ENST00000384538 135 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 SKINT1L-201ENST00000401057 817 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGN3Q15651 AC009302.1-201ENST00000417147 390 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 PTP4A1P5-201ENST00000420305 455 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGN3Q15651 AL138787.1-202ENST00000437804 898 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 AC006480.1-201ENST00000449887 378 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 CEACAMP4-201ENST00000457676 421 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 RPS7P7-201ENST00000463499 571 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 AC087385.1-201ENST00000475062 312 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 RPS4XP15-201ENST00000489210 795 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGN3Q15651 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HMGN3Q15651 AC008489.1-201ENST00000524271 483 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 MTND5P21-201ENST00000531961 522 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HMGN3Q15651 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGN3Q15651 TRAV37-201ENST00000553906 342 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.14□□□□□ -1.91
HMGN3Q15651 AC120057.2-201ENST00000571520 271 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 HNRNPCP4-201ENST00000571636 900 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.14□□□□□ -1.91
HMGN3Q15651 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGN3Q15651 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGN3Q15651 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HMGN3Q15651 AL049555.1-201ENST00000562834 1933 ntBASIC3.14□□□□□ -1.91
HMGN3Q15651 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HMGN3Q15651 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMGN3Q15651 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGN3Q15651 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMGN3Q15651 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMGN3Q15651 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMGN3Q15651 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMGN3Q15651 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
HMGN3Q15651 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGN3Q15651 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGN3Q15651 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HMGN3Q15651 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMGN3Q15651 AC136624.1-201ENST00000400791 413 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 ZNF602P-201ENST00000405929 924 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGN3Q15651 RNA5SP317-201ENST00000410176 116 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 RNA5SP311-201ENST00000411290 116 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 AL691447.1-201ENST00000419456 387 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 AL390879.2-203ENST00000426943 1121 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGN3Q15651 MOB1AP1-201ENST00000430903 535 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 AC016712.1-201ENST00000431088 378 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 RPS20P1-201ENST00000434853 354 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGN3Q15651 CYCSP53-201ENST00000455540 265 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 AL133244.1-201ENST00000456007 258 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 CFTRP1-201ENST00000456646 183 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 AC010401.1-201ENST00000463867 348 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 ACTG1P13-201ENST00000486987 1043 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 RPL23AP73-201ENST00000492507 471 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGN3Q15651 RN7SKP122-201ENST00000515923 296 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 RNA5SP315-201ENST00000516340 116 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 RNA5SP312-201ENST00000517068 116 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGN3Q15651 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGN3Q15651 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGN3Q15651 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGN3Q15651 AC015726.1-201ENST00000602353 681 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 AL049634.3-201ENST00000604968 457 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 SNORA62.6-201ENST00000606322 83 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.13□□□□□ -1.91
HMGN3Q15651 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGN3Q15651 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMGN3Q15651 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMGN3Q15651 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HMGN3Q15651 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
HMGN3Q15651 AC009229.4-201ENST00000623854 1947 ntBASIC3.13□□□□□ -1.91
HMGN3Q15651 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGN3Q15651 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGN3Q15651 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.12□□□□□ -1.91
HMGN3Q15651 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
HMGN3Q15651 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGN3Q15651 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HMGN3Q15651 AL121657.1-201ENST00000327215 531 ntBASIC3.12□□□□□ -1.91
HMGN3Q15651 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HMGN3Q15651 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HMGN3Q15651 RNA5SP424-201ENST00000390988 115 ntBASIC3.12□□□□□ -1.91
HMGN3Q15651 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGN3Q15651 AC007068.1-201ENST00000396690 844 ntBASIC3.12□□□□□ -1.91
HMGN3Q15651 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGN3Q15651 RPS12P23-201ENST00000419579 400 ntBASIC3.12□□□□□ -1.91
HMGN3Q15651 AC006989.1-201ENST00000427212 131 ntBASIC3.12□□□□□ -1.91
HMGN3Q15651 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGN3Q15651 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.12□□□□□ -1.91
HMGN3Q15651 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.12□□□□□ -1.91
HMGN3Q15651 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.12□□□□□ -1.91
HMGN3Q15651 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms