Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MTCO3P4-201ENST00000419236 787 ntBASIC4.14□□□□□ -1.75
CBX1P83916 CHIAP3-201ENST00000423668 1133 ntBASIC4.14□□□□□ -1.75
CBX1P83916 CR848007.2-201ENST00000424918 787 ntBASIC4.14□□□□□ -1.75
CBX1P83916 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.14□□□□□ -1.75
CBX1P83916 RPS29P19-201ENST00000479709 171 ntBASIC4.14□□□□□ -1.75
CBX1P83916 RPL23AP44-201ENST00000482216 473 ntBASIC4.14□□□□□ -1.75
CBX1P83916 TRBV12-2-201ENST00000489763 344 ntBASIC4.14□□□□□ -1.75
CBX1P83916 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.14□□□□□ -1.75
CBX1P83916 MTND4LP2-201ENST00000502312 285 ntBASIC4.14□□□□□ -1.75
CBX1P83916 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.14□□□□□ -1.75
CBX1P83916 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.14□□□□□ -1.75
CBX1P83916 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.14□□□□□ -1.75
CBX1P83916 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.14□□□□□ -1.75
CBX1P83916 IGKV2-36-201ENST00000519999 223 ntBASIC4.14□□□□□ -1.75
CBX1P83916 AC093331.1-201ENST00000521474 169 ntBASIC4.14□□□□□ -1.75
CBX1P83916 MTND1P6-201ENST00000523621 946 ntBASIC4.14□□□□□ -1.75
CBX1P83916 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.14□□□□□ -1.75
CBX1P83916 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.14□□□□□ -1.75
CBX1P83916 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.14□□□□□ -1.75
CBX1P83916 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.14□□□□□ -1.75
CBX1P83916 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.14□□□□□ -1.75
CBX1P83916 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.14□□□□□ -1.75
CBX1P83916 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.14□□□□□ -1.75
CBX1P83916 AC079791.1-201ENST00000605356 973 ntBASIC4.14□□□□□ -1.75
CBX1P83916 AL713922.2-201ENST00000619384 716 ntBASIC4.14□□□□□ -1.75
CBX1P83916 AP000843.1-201ENST00000624880 701 ntBASIC4.14□□□□□ -1.75
CBX1P83916 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CBX1P83916 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CBX1P83916 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CBX1P83916 AL513302.2-201ENST00000562313 1842 ntBASIC4.14□□□□□ -1.75
CBX1P83916 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.13□□□□□ -1.75
CBX1P83916 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CBX1P83916 AL139811.1-201ENST00000424779 2299 ntBASIC4.13□□□□□ -1.75
CBX1P83916 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CBX1P83916 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CBX1P83916 SNORA71.2-201ENST00000364941 134 ntBASIC4.13□□□□□ -1.75
CBX1P83916 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.13□□□□□ -1.75
CBX1P83916 RNU6-171P-201ENST00000384354 107 ntBASIC4.13□□□□□ -1.75
CBX1P83916 RNU6-883P-201ENST00000384597 107 ntBASIC4.13□□□□□ -1.75
CBX1P83916 PTMAP5-201ENST00000393073 333 ntBASIC4.13□□□□□ -1.75
CBX1P83916 AL139095.3-201ENST00000419672 1203 ntBASIC4.13□□□□□ -1.75
CBX1P83916 AL031736.2-201ENST00000426573 787 ntBASIC4.13□□□□□ -1.75
CBX1P83916 USP9YP31-201ENST00000431405 881 ntBASIC4.13□□□□□ -1.75
CBX1P83916 ZNF965P-201ENST00000432501 817 ntBASIC4.13□□□□□ -1.75
CBX1P83916 AL035458.1-201ENST00000433096 585 ntBASIC4.13□□□□□ -1.75
CBX1P83916 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.13□□□□□ -1.75
CBX1P83916 ELOCP11-201ENST00000436690 332 ntBASIC4.13□□□□□ -1.75
CBX1P83916 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CBX1P83916 ELOCP16-201ENST00000444494 332 ntBASIC4.13□□□□□ -1.75
CBX1P83916 TPTE2P6-202ENST00000445572 1007 ntBASIC4.13□□□□□ -1.75
CBX1P83916 RN7SL442P-201ENST00000473804 320 ntBASIC4.13□□□□□ -1.75
CBX1P83916 RPL30P11-201ENST00000495304 339 ntBASIC4.13□□□□□ -1.75
CBX1P83916 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.13□□□□□ -1.75
CBX1P83916 AC006499.3-201ENST00000506077 748 ntBASIC4.13□□□□□ -1.75
CBX1P83916 PHBP14-201ENST00000512887 367 ntBASIC4.13□□□□□ -1.75
CBX1P83916 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.13□□□□□ -1.75
CBX1P83916 RNU7-143P-201ENST00000516781 65 ntBASIC4.13□□□□□ -1.75
CBX1P83916 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.13□□□□□ -1.75
CBX1P83916 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.13□□□□□ -1.75
CBX1P83916 SOX5P1-201ENST00000524155 1127 ntBASIC4.13□□□□□ -1.75
CBX1P83916 OR4A2P-201ENST00000527276 913 ntBASIC4.13□□□□□ -1.75
CBX1P83916 POLR2KP1-201ENST00000553226 168 ntBASIC4.13□□□□□ -1.75
CBX1P83916 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.13□□□□□ -1.75
CBX1P83916 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.13□□□□□ -1.75
CBX1P83916 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.13□□□□□ -1.75
CBX1P83916 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.13□□□□□ -1.75
CBX1P83916 MIR3176-201ENST00000582210 90 ntBASIC4.13□□□□□ -1.75
CBX1P83916 AC012417.1-201ENST00000582307 1039 ntBASIC4.13□□□□□ -1.75
CBX1P83916 AC006116.3-201ENST00000592968 361 ntBASIC4.13□□□□□ -1.75
CBX1P83916 PCNAP1-202ENST00000595299 752 ntBASIC4.13□□□□□ -1.75
CBX1P83916 AC073091.2-201ENST00000603205 907 ntBASIC4.13□□□□□ -1.75
CBX1P83916 AL355802.4-201ENST00000607635 548 ntBASIC4.13□□□□□ -1.75
CBX1P83916 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.13□□□□□ -1.75
CBX1P83916 AC090229.1-201ENST00000590983 1609 ntBASIC4.13□□□□□ -1.75
CBX1P83916 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.12□□□□□ -1.75
CBX1P83916 SAGE2P-201ENST00000420011 2126 ntBASIC4.12□□□□□ -1.75
CBX1P83916 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CBX1P83916 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CBX1P83916 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CBX1P83916 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CBX1P83916 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CBX1P83916 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.12□□□□□ -1.75
CBX1P83916 SNORD51.1-201ENST00000365405 77 ntBASIC4.12□□□□□ -1.75
CBX1P83916 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CBX1P83916 MIR3065-201ENST00000390137 79 ntBASIC4.12□□□□□ -1.75
CBX1P83916 EI24P2-201ENST00000397776 1076 ntBASIC4.12□□□□□ -1.75
CBX1P83916 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.12□□□□□ -1.75
CBX1P83916 SDHCP2-201ENST00000398565 501 ntBASIC4.12□□□□□ -1.75
CBX1P83916 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.12□□□□□ -1.75
CBX1P83916 AC069218.2-201ENST00000411665 344 ntBASIC4.12□□□□□ -1.75
CBX1P83916 RPS20P25-201ENST00000412447 352 ntBASIC4.12□□□□□ -1.75
CBX1P83916 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.12□□□□□ -1.75
CBX1P83916 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.12□□□□□ -1.75
CBX1P83916 MTND4P24-201ENST00000424002 397 ntBASIC4.12□□□□□ -1.75
CBX1P83916 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CBX1P83916 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.12□□□□□ -1.75
CBX1P83916 AL353093.1-201ENST00000441292 436 ntBASIC4.12□□□□□ -1.75
CBX1P83916 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.12□□□□□ -1.75
CBX1P83916 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.12□□□□□ -1.75
CBX1P83916 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms