Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 OR6E1P-201ENST00000414424 923 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 SDCBPP2-201ENST00000424643 885 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.88□□□□□ -1.63
CLRN1P58418 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.88□□□□□ -1.63
CLRN1P58418 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.88□□□□□ -1.63
CLRN1P58418 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.88□□□□□ -1.63
CLRN1P58418 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.88□□□□□ -1.63
CLRN1P58418 NPM1P18-201ENST00000434232 732 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.88□□□□□ -1.63
CLRN1P58418 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.88□□□□□ -1.63
CLRN1P58418 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.88□□□□□ -1.63
CLRN1P58418 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.88□□□□□ -1.63
CLRN1P58418 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLRN1P58418 AL033528.1-201ENST00000453780 140 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 RNU6-1218P-201ENST00000458990 108 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 AC074386.1-201ENST00000476560 767 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.88□□□□□ -1.63
CLRN1P58418 LARP1BP2-201ENST00000486594 519 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 RPL7P24-201ENST00000493052 752 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 AC116353.2-201ENST00000505332 712 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.88□□□□□ -1.63
CLRN1P58418 AC026412.2-201ENST00000512270 1075 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 RNU6-718P-201ENST00000516166 105 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.88□□□□□ -1.63
CLRN1P58418 NRBF2P4-201ENST00000520874 850 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.88□□□□□ -1.63
CLRN1P58418 AL389895.1-201ENST00000554127 252 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.88□□□□□ -1.63
CLRN1P58418 AC092325.1-201ENST00000566449 554 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 MIR5697-201ENST00000578045 78 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 AC008521.2-201ENST00000591021 259 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.88□□□□□ -1.63
CLRN1P58418 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.88□□□□□ -1.63
CLRN1P58418 BNIP3P23-201ENST00000599655 511 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.88□□□□□ -1.63
CLRN1P58418 AL022154.1-201ENST00000604698 785 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 AL357078.3-201ENST00000607528 618 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 AC090517.2-201ENST00000614966 680 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 AC016769.4-201ENST00000616893 535 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.88□□□□□ -1.63
CLRN1P58418 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.88□□□□□ -1.63
CLRN1P58418 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.88□□□□□ -1.63
CLRN1P58418 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.88□□□□□ -1.63
CLRN1P58418 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLRN1P58418 DCAF13P1-201ENST00000495256 1330 ntBASIC4.88□□□□□ -1.63
CLRN1P58418 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.88□□□□□ -1.63
CLRN1P58418 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLRN1P58418 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLRN1P58418 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLRN1P58418 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLRN1P58418 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.88□□□□□ -1.63
CLRN1P58418 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CLRN1P58418 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CLRN1P58418 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CLRN1P58418 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLRN1P58418 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
CLRN1P58418 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLRN1P58418 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLRN1P58418 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.87□□□□□ -1.63
CLRN1P58418 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLRN1P58418 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLRN1P58418 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CLRN1P58418 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CLRN1P58418 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
CLRN1P58418 RN7SKP292-201ENST00000365522 317 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLRN1P58418 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLRN1P58418 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.87□□□□□ -1.63
CLRN1P58418 RNY3P14-201ENST00000384309 102 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 Y_RNA.554-201ENST00000384672 102 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 U8.14-201ENST00000390843 143 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AL121972.1-201ENST00000402023 252 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 PPIAP9-201ENST00000403866 498 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 PRRC2CP1-201ENST00000404428 159 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 MIR1282-201ENST00000408865 101 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 SDHDP6-201ENST00000414693 480 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CLRN1P58418 Z93019.1-201ENST00000416450 973 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 RPL7P30-201ENST00000420888 709 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.87□□□□□ -1.63
CLRN1P58418 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLRN1P58418 RPS27AP6-201ENST00000427962 448 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.87□□□□□ -1.63
CLRN1P58418 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.87□□□□□ -1.63
CLRN1P58418 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.87□□□□□ -1.63
CLRN1P58418 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.87□□□□□ -1.63
CLRN1P58418 AC064862.4-201ENST00000442180 334 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.87□□□□□ -1.63
CLRN1P58418 MTCO1P48-201ENST00000448024 1096 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 RPL31P15-201ENST00000449770 338 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 FGF7P6-202ENST00000451282 293 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AC098824.1-201ENST00000453565 980 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AC092757.1-201ENST00000467293 467 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CLRN1P58418 RPL9P6-201ENST00000492764 598 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AC105252.1-201ENST00000503089 286 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AC021678.1-201ENST00000505195 936 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms