Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN18P56856 BNIP3P7-201ENST00000605641 516 ntBASIC3.72□□□□□ -1.81
CLDN18P56856 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN18P56856 RNU4-89P-201ENST00000607443 133 ntBASIC3.72□□□□□ -1.81
CLDN18P56856 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN18P56856 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CLDN18P56856 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN18P56856 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN18P56856 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN18P56856 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN18P56856 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
CLDN18P56856 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN18P56856 MTND4P31-201ENST00000425607 1343 ntBASIC3.71□□□□□ -1.81
CLDN18P56856 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CLDN18P56856 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CLDN18P56856 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
CLDN18P56856 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN18P56856 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.71□□□□□ -1.82
CLDN18P56856 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CLDN18P56856 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CLDN18P56856 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN18P56856 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN18P56856 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CLDN18P56856 TPT1P2-201ENST00000413105 503 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 YY1P1-201ENST00000427625 668 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 DYNLL1P7-201ENST00000429273 258 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN18P56856 BX119904.1-201ENST00000432026 348 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN18P56856 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN18P56856 RPL23AP89-201ENST00000439324 255 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 AC006011.1-201ENST00000442758 349 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN18P56856 RPL21P71-201ENST00000465598 459 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 FTH1P2-201ENST00000466086 412 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 AC106872.2-201ENST00000494303 480 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 AC092045.1-201ENST00000495716 1231 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 OR52A4P-203ENST00000498233 1014 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN18P56856 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 HPRT1P2-201ENST00000505250 544 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 AC110792.2-201ENST00000510278 224 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN18P56856 IGHV3-32-201ENST00000519182 355 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN18P56856 AP002812.4-201ENST00000532139 286 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 AC084824.1-201ENST00000550917 1005 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 AC063950.1-201ENST00000552036 308 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN18P56856 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.71□□□□□ -1.82
CLDN18P56856 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN18P56856 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN18P56856 AL133247.2-201ENST00000603236 482 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 uc_338.32-201ENST00000615087 172 ntBASIC3.71□□□□□ -1.82
CLDN18P56856 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN18P56856 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN18P56856 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN18P56856 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CLDN18P56856 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN18P56856 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN18P56856 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN18P56856 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN18P56856 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CLDN18P56856 MIR93-201ENST00000385024 80 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 SNORA57.1-201ENST00000391227 145 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 PPIAP31-201ENST00000405422 495 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 RPL21P65-201ENST00000406094 466 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 AC115285.1-201ENST00000424879 736 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN18P56856 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN18P56856 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN18P56856 AL353748.1-201ENST00000440753 474 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 AC006326.1-201ENST00000445465 787 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 AL451050.1-201ENST00000450126 415 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN18P56856 SNORD108-201ENST00000459332 71 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 RPL38P1-201ENST00000460914 211 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 AC092691.2-201ENST00000461787 803 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 RPL7P1-201ENST00000468161 747 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 AC018635.1-201ENST00000468292 1030 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 RPL7P9-201ENST00000468715 747 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN18P56856 AC020593.1-201ENST00000507399 299 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 AC108064.1-201ENST00000513791 460 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN18P56856 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN18P56856 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN18P56856 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN18P56856 OR8R1P-201ENST00000543943 764 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.7□□□□□ -1.82
CLDN18P56856 CBX3P5-201ENST00000552017 521 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 POLR2KP1-201ENST00000553226 168 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 VN1R85P-201ENST00000601587 426 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 AP003117.2-201ENST00000606010 545 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.7□□□□□ -1.82
CLDN18P56856 AC138907.10-201ENST00000623708 983 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms