Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.85□□□□□ -1.79
LIM2P55344 AL356276.2-201ENST00000435919 558 ntBASIC3.85□□□□□ -1.79
LIM2P55344 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.85□□□□□ -1.79
LIM2P55344 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.85□□□□□ -1.79
LIM2P55344 AC069540.1-201ENST00000446320 988 ntBASIC3.85□□□□□ -1.79
LIM2P55344 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.85□□□□□ -1.79
LIM2P55344 HMGB3P22-202ENST00000451823 572 ntBASIC3.85□□□□□ -1.79
LIM2P55344 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.85□□□□□ -1.79
LIM2P55344 RPS7P7-201ENST00000463499 571 ntBASIC3.85□□□□□ -1.79
LIM2P55344 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.85□□□□□ -1.79
LIM2P55344 AC078857.1-201ENST00000469870 667 ntBASIC3.85□□□□□ -1.79
LIM2P55344 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.85□□□□□ -1.79
LIM2P55344 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.85□□□□□ -1.79
LIM2P55344 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.85□□□□□ -1.79
LIM2P55344 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.85□□□□□ -1.79
LIM2P55344 RNU6-347P-201ENST00000516658 105 ntBASIC3.85□□□□□ -1.79
LIM2P55344 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LIM2P55344 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
LIM2P55344 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.85□□□□□ -1.79
LIM2P55344 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.85□□□□□ -1.79
LIM2P55344 AC025627.2-201ENST00000576220 160 ntBASIC3.85□□□□□ -1.79
LIM2P55344 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.85□□□□□ -1.79
LIM2P55344 AL591034.3-201ENST00000605511 685 ntBASIC3.85□□□□□ -1.79
LIM2P55344 AC090525.3-201ENST00000605601 189 ntBASIC3.85□□□□□ -1.79
LIM2P55344 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.85□□□□□ -1.79
LIM2P55344 AC243654.2-201ENST00000612843 443 ntBASIC3.85□□□□□ -1.79
LIM2P55344 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.85□□□□□ -1.79
LIM2P55344 AC097460.3-201ENST00000623099 442 ntBASIC3.85□□□□□ -1.79
LIM2P55344 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.85□□□□□ -1.79
LIM2P55344 AC083865.1-201ENST00000636634 831 ntBASIC3.85□□□□□ -1.79
LIM2P55344 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LIM2P55344 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
LIM2P55344 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
LIM2P55344 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LIM2P55344 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
LIM2P55344 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.85□□□□□ -1.79
LIM2P55344 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LIM2P55344 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.85□□□□□ -1.79
LIM2P55344 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
LIM2P55344 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
LIM2P55344 RNU6-792P-201ENST00000363490 107 ntBASIC3.84□□□□□ -1.79
LIM2P55344 RNU6-650P-201ENST00000365658 111 ntBASIC3.84□□□□□ -1.79
LIM2P55344 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
LIM2P55344 AL590290.1-201ENST00000405336 380 ntBASIC3.84□□□□□ -1.79
LIM2P55344 AL512430.2-201ENST00000406786 339 ntBASIC3.84□□□□□ -1.79
LIM2P55344 TCEA1P4-201ENST00000415066 844 ntBASIC3.84□□□□□ -1.79
LIM2P55344 AL356095.1-201ENST00000417217 199 ntBASIC3.84□□□□□ -1.79
LIM2P55344 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.84□□□□□ -1.79
LIM2P55344 FO393419.3-201ENST00000428741 282 ntBASIC3.84□□□□□ -1.79
LIM2P55344 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.84□□□□□ -1.79
LIM2P55344 MTCO1P54-201ENST00000430139 712 ntBASIC3.84□□□□□ -1.79
LIM2P55344 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.84□□□□□ -1.79
LIM2P55344 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.84□□□□□ -1.79
LIM2P55344 MTND6P18-201ENST00000439477 513 ntBASIC3.84□□□□□ -1.79
LIM2P55344 TPTE2P3-201ENST00000441562 1189 ntBASIC3.84□□□□□ -1.79
LIM2P55344 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LIM2P55344 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.84□□□□□ -1.79
LIM2P55344 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.84□□□□□ -1.79
LIM2P55344 CCDC75P1-201ENST00000469247 791 ntBASIC3.84□□□□□ -1.79
LIM2P55344 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.84□□□□□ -1.79
LIM2P55344 AC010285.3-201ENST00000511668 676 ntBASIC3.84□□□□□ -1.79
LIM2P55344 AC092593.2-201ENST00000513866 913 ntBASIC3.84□□□□□ -1.79
LIM2P55344 IGKV2-38-201ENST00000517443 247 ntBASIC3.84□□□□□ -1.79
LIM2P55344 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.84□□□□□ -1.79
LIM2P55344 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.84□□□□□ -1.79
LIM2P55344 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.84□□□□□ -1.79
LIM2P55344 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.84□□□□□ -1.79
LIM2P55344 DYNLL1P4-201ENST00000549314 266 ntBASIC3.84□□□□□ -1.79
LIM2P55344 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.84□□□□□ -1.79
LIM2P55344 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.84□□□□□ -1.79
LIM2P55344 AC136624.4-201ENST00000573044 370 ntBASIC3.84□□□□□ -1.79
LIM2P55344 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LIM2P55344 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.84□□□□□ -1.79
LIM2P55344 AC104662.1-201ENST00000604448 511 ntBASIC3.84□□□□□ -1.79
LIM2P55344 OR2BH1P-201ENST00000608850 864 ntBASIC3.84□□□□□ -1.79
LIM2P55344 AC055764.2-201ENST00000610089 670 ntBASIC3.84□□□□□ -1.79
LIM2P55344 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.84□□□□□ -1.79
LIM2P55344 AC123768.4-201ENST00000616244 701 ntBASIC3.84□□□□□ -1.79
LIM2P55344 AP006248.3-201ENST00000623580 594 ntBASIC3.84□□□□□ -1.79
LIM2P55344 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.84□□□□□ -1.79
LIM2P55344 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
LIM2P55344 MTND4P31-201ENST00000425607 1343 ntBASIC3.84□□□□□ -1.79
LIM2P55344 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LIM2P55344 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
LIM2P55344 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
LIM2P55344 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
LIM2P55344 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
LIM2P55344 AC018555.1-201ENST00000567548 1980 ntBASIC3.83□□□□□ -1.8
LIM2P55344 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LIM2P55344 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
LIM2P55344 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LIM2P55344 RNA5SP317-201ENST00000410176 116 ntBASIC3.83□□□□□ -1.8
LIM2P55344 RN7SKP247-201ENST00000411094 308 ntBASIC3.83□□□□□ -1.8
LIM2P55344 RNA5SP311-201ENST00000411290 116 ntBASIC3.83□□□□□ -1.8
LIM2P55344 MTCO3P4-201ENST00000419236 787 ntBASIC3.83□□□□□ -1.8
LIM2P55344 PNRC2P1-201ENST00000423940 420 ntBASIC3.83□□□□□ -1.8
LIM2P55344 AC115285.1-201ENST00000424879 736 ntBASIC3.83□□□□□ -1.8
LIM2P55344 SEC63P1-201ENST00000425785 1258 ntBASIC3.83□□□□□ -1.8
LIM2P55344 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.83□□□□□ -1.8
LIM2P55344 AL158073.1-201ENST00000426848 1104 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms