Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.35□□□□□ -1.39
USP11P51784 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.35□□□□□ -1.39
USP11P51784 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC6.35□□□□□ -1.39
USP11P51784 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.35□□□□□ -1.39
USP11P51784 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.35□□□□□ -1.39
USP11P51784 AC015720.2-201ENST00000567709 334 ntBASIC6.35□□□□□ -1.39
USP11P51784 AC137800.2-201ENST00000574375 120 ntBASIC6.35□□□□□ -1.39
USP11P51784 AC136618.2-201ENST00000575091 400 ntBASIC6.35□□□□□ -1.39
USP11P51784 SNORD95-201ENST00000579879 68 ntBASIC6.35□□□□□ -1.39
USP11P51784 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.35□□□□□ -1.39
USP11P51784 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC6.35□□□□□ -1.39
USP11P51784 BNIP3P8-201ENST00000597863 560 ntBASIC6.35□□□□□ -1.39
USP11P51784 AC011445.2-201ENST00000599274 173 ntBASIC6.35□□□□□ -1.39
USP11P51784 KC877982.1-201ENST00000602313 470 ntBASIC6.35□□□□□ -1.39
USP11P51784 AC010200.2-201ENST00000605098 235 ntBASIC6.35□□□□□ -1.39
USP11P51784 AC103710.1-201ENST00000610003 901 ntBASIC6.35□□□□□ -1.39
USP11P51784 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.35□□□□□ -1.39
USP11P51784 AL139089.1-201ENST00000620372 975 ntBASIC6.35□□□□□ -1.39
USP11P51784 AP003400.3-201ENST00000624904 346 ntBASIC6.35□□□□□ -1.39
USP11P51784 MIR3662-201ENST00000637030 95 ntBASIC6.35□□□□□ -1.39
USP11P51784 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USP11P51784 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.35□□□□□ -1.39
USP11P51784 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
USP11P51784 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
USP11P51784 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USP11P51784 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USP11P51784 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USP11P51784 MT-RNR2-201ENST00000387347 1559 ntBASIC6.35□□□□□ -1.39
USP11P51784 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
USP11P51784 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USP11P51784 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.34□□□□□ -1.39
USP11P51784 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USP11P51784 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USP11P51784 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.34□□□□□ -1.39
USP11P51784 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.34□□□□□ -1.39
USP11P51784 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.34□□□□□ -1.39
USP11P51784 HSPA8P17-201ENST00000427029 1382 ntBASIC6.34□□□□□ -1.39
USP11P51784 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
USP11P51784 AC112255.1-201ENST00000624070 2493 ntBASIC6.34□□□□□ -1.39
USP11P51784 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USP11P51784 MIR323A-201ENST00000362199 86 ntBASIC6.34□□□□□ -1.39
USP11P51784 RNU4-79P-201ENST00000362764 141 ntBASIC6.34□□□□□ -1.39
USP11P51784 RN7SKP6-201ENST00000364795 319 ntBASIC6.34□□□□□ -1.39
USP11P51784 RNU4-2-201ENST00000365668 141 ntBASIC6.34□□□□□ -1.39
USP11P51784 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USP11P51784 MIR143-201ENST00000385300 106 ntBASIC6.34□□□□□ -1.39
USP11P51784 RPS3AP36-201ENST00000398190 775 ntBASIC6.34□□□□□ -1.39
USP11P51784 AL034403.1-201ENST00000399414 885 ntBASIC6.34□□□□□ -1.39
USP11P51784 AMD1P2-201ENST00000412936 992 ntBASIC6.34□□□□□ -1.39
USP11P51784 AC109780.2-201ENST00000413467 845 ntBASIC6.34□□□□□ -1.39
USP11P51784 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.34□□□□□ -1.39
USP11P51784 MTCYBP6-201ENST00000441810 138 ntBASIC6.34□□□□□ -1.39
USP11P51784 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC6.34□□□□□ -1.39
USP11P51784 AC019185.1-201ENST00000442718 389 ntBASIC6.34□□□□□ -1.39
USP11P51784 AC104306.1-201ENST00000449702 371 ntBASIC6.34□□□□□ -1.39
USP11P51784 snoU109.1-201ENST00000459339 135 ntBASIC6.34□□□□□ -1.39
USP11P51784 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC6.34□□□□□ -1.39
USP11P51784 AC108078.3-201ENST00000502633 489 ntBASIC6.34□□□□□ -1.39
USP11P51784 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.34□□□□□ -1.39
USP11P51784 AC011352.3-201ENST00000505162 593 ntBASIC6.34□□□□□ -1.39
USP11P51784 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC6.34□□□□□ -1.39
USP11P51784 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.34□□□□□ -1.39
USP11P51784 OR4A12P-201ENST00000530847 918 ntBASIC6.34□□□□□ -1.39
USP11P51784 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.34□□□□□ -1.39
USP11P51784 MIR5697-201ENST00000578045 78 ntBASIC6.34□□□□□ -1.39
USP11P51784 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC6.34□□□□□ -1.39
USP11P51784 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.34□□□□□ -1.39
USP11P51784 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC6.34□□□□□ -1.39
USP11P51784 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
USP11P51784 AL589674.2-201ENST00000604304 337 ntBASIC6.34□□□□□ -1.39
USP11P51784 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.34□□□□□ -1.39
USP11P51784 AL136295.6-201ENST00000610486 658 ntBASIC6.34□□□□□ -1.39
USP11P51784 AL365204.3-201ENST00000612448 685 ntBASIC6.34□□□□□ -1.39
USP11P51784 AC008250.2-201ENST00000615261 205 ntBASIC6.34□□□□□ -1.39
USP11P51784 AP001506.1-201ENST00000615444 211 ntBASIC6.34□□□□□ -1.39
USP11P51784 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
USP11P51784 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.34□□□□□ -1.39
USP11P51784 AC079228.1-201ENST00000624774 1049 ntBASIC6.34□□□□□ -1.39
USP11P51784 AC006065.6-201ENST00000625201 545 ntBASIC6.34□□□□□ -1.39
USP11P51784 MTND5P42-201ENST00000637720 498 ntBASIC6.34□□□□□ -1.39
USP11P51784 AC239868.2-201ENST00000564237 4527 ntBASIC6.34□□□□□ -1.39
USP11P51784 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
USP11P51784 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
USP11P51784 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.34□□□□□ -1.39
USP11P51784 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
USP11P51784 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.4
USP11P51784 AL031985.3-201ENST00000565390 2449 ntBASIC6.34□□□□□ -1.4
USP11P51784 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
USP11P51784 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USP11P51784 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
USP11P51784 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC6.33□□□□□ -1.4
USP11P51784 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USP11P51784 AC079097.1-201ENST00000512187 1399 ntBASIC6.33□□□□□ -1.4
USP11P51784 AL645937.1-201ENST00000641739 1652 ntBASIC6.33□□□□□ -1.4
USP11P51784 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USP11P51784 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
USP11P51784 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USP11P51784 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
USP11P51784 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.33□□□□□ -1.4
USP11P51784 RNA5SP242-201ENST00000364171 118 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms