Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SLC1A1P43005 USP9YP5-201ENST00000511770 630 ntBASIC4.05□□□□□ -1.76
SLC1A1P43005 RN7SKP209-201ENST00000516888 304 ntBASIC4.05□□□□□ -1.76
SLC1A1P43005 C1GALT1P3-201ENST00000522049 819 ntBASIC4.05□□□□□ -1.76
SLC1A1P43005 TOMM20P2-201ENST00000540082 421 ntBASIC4.05□□□□□ -1.76
SLC1A1P43005 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC1A1P43005 NPM1P47-201ENST00000560843 856 ntBASIC4.05□□□□□ -1.76
SLC1A1P43005 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC1A1P43005 HNRNPCP4-201ENST00000571636 900 ntBASIC4.05□□□□□ -1.76
SLC1A1P43005 AC023575.1-201ENST00000580510 358 ntBASIC4.05□□□□□ -1.76
SLC1A1P43005 PSMA6P4-201ENST00000603247 718 ntBASIC4.05□□□□□ -1.76
SLC1A1P43005 AL137849.1-201ENST00000604767 169 ntBASIC4.05□□□□□ -1.76
SLC1A1P43005 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.05□□□□□ -1.76
SLC1A1P43005 AC017076.1-201ENST00000607613 578 ntBASIC4.05□□□□□ -1.76
SLC1A1P43005 AL391834.1-201ENST00000609609 560 ntBASIC4.05□□□□□ -1.76
SLC1A1P43005 AC010435.1-201ENST00000623353 1177 ntBASIC4.05□□□□□ -1.76
SLC1A1P43005 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC1A1P43005 MIR492-201ENST00000638676 116 ntBASIC4.05□□□□□ -1.76
SLC1A1P43005 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SLC1A1P43005 AL049555.1-201ENST00000562834 1933 ntBASIC4.05□□□□□ -1.76
SLC1A1P43005 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SLC1A1P43005 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC1A1P43005 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC1A1P43005 AC009229.4-201ENST00000623854 1947 ntBASIC4.04□□□□□ -1.76
SLC1A1P43005 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SLC1A1P43005 MIR423-201ENST00000362201 94 ntBASIC4.04□□□□□ -1.76
SLC1A1P43005 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC1A1P43005 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC1A1P43005 RNU6-146P-201ENST00000384602 108 ntBASIC4.04□□□□□ -1.76
SLC1A1P43005 HSPE1P8-201ENST00000406997 288 ntBASIC4.04□□□□□ -1.76
SLC1A1P43005 RNU4-6P-201ENST00000410804 122 ntBASIC4.04□□□□□ -1.76
SLC1A1P43005 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.04□□□□□ -1.76
SLC1A1P43005 AL356095.1-201ENST00000417217 199 ntBASIC4.04□□□□□ -1.76
SLC1A1P43005 Z97055.1-201ENST00000419730 712 ntBASIC4.04□□□□□ -1.76
SLC1A1P43005 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC1A1P43005 RPL21P109-201ENST00000422213 475 ntBASIC4.04□□□□□ -1.76
SLC1A1P43005 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC1A1P43005 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC1A1P43005 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC1A1P43005 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SLC1A1P43005 IFNWP4-201ENST00000453148 294 ntBASIC4.04□□□□□ -1.76
SLC1A1P43005 RPL5P32-201ENST00000454085 879 ntBASIC4.04□□□□□ -1.76
SLC1A1P43005 AC005229.2-201ENST00000456995 399 ntBASIC4.04□□□□□ -1.76
SLC1A1P43005 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.04□□□□□ -1.76
SLC1A1P43005 NIPA2P2-201ENST00000496376 1083 ntBASIC4.04□□□□□ -1.76
SLC1A1P43005 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC1A1P43005 AC025884.1-201ENST00000556034 378 ntBASIC4.04□□□□□ -1.76
SLC1A1P43005 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.04□□□□□ -1.76
SLC1A1P43005 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SLC1A1P43005 MIR3939-201ENST00000582614 106 ntBASIC4.04□□□□□ -1.76
SLC1A1P43005 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.04□□□□□ -1.76
SLC1A1P43005 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SLC1A1P43005 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC1A1P43005 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC1A1P43005 CYP1D1P-201ENST00000416662 1433 ntBASIC4.04□□□□□ -1.76
SLC1A1P43005 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SLC1A1P43005 AC007529.1-201ENST00000418574 2178 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SLC1A1P43005 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SLC1A1P43005 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SLC1A1P43005 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC1A1P43005 RNU6-819P-201ENST00000364116 107 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 RNA5SP97-201ENST00000365006 84 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 RPS26P8-201ENST00000393490 348 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 RPL26P37-201ENST00000411983 438 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 SEC63P1-201ENST00000425785 1258 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 BMS1P19-201ENST00000433925 393 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC1A1P43005 Z99127.2-201ENST00000441426 334 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 TPT1P13-201ENST00000449760 499 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC1A1P43005 PCNAP1-201ENST00000505363 709 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC1A1P43005 SNORA31.9-201ENST00000516429 84 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 RAB9BP1-201ENST00000519581 626 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 HIGD1AP18-201ENST00000520730 278 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC1A1P43005 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC1A1P43005 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC1A1P43005 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC1A1P43005 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC1A1P43005 AC022884.3-201ENST00000579571 248 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 KPNA2P3-201ENST00000584190 848 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC1A1P43005 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC1A1P43005 AC005962.2-201ENST00000611427 652 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 AC016957.2-201ENST00000616998 848 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 uc_338.9-201ENST00000617424 182 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC1A1P43005 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SLC1A1P43005 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SLC1A1P43005 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SLC1A1P43005 AC114546.3-201ENST00000623582 1734 ntBASIC4.03□□□□□ -1.76
SLC1A1P43005 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SLC1A1P43005 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
SLC1A1P43005 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
SLC1A1P43005 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SLC1A1P43005 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
SLC1A1P43005 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC1A1P43005 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms