Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HADHAP40939 AL133243.3-201ENST00000617415 3004 ntBASIC4.67□□□□□ -1.66
HADHAP40939 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HADHAP40939 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HADHAP40939 AC087190.4-201ENST00000574616 8334 ntBASIC4.67□□□□□ -1.66
HADHAP40939 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HADHAP40939 MFSD8-220ENST00000641243 1422 ntBASIC4.67□□□□□ -1.66
HADHAP40939 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HADHAP40939 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.67□□□□□ -1.66
HADHAP40939 MIR298-201ENST00000401212 88 ntBASIC4.67□□□□□ -1.66
HADHAP40939 RSL24D1P1-201ENST00000404972 493 ntBASIC4.67□□□□□ -1.66
HADHAP40939 OR51B3P-201ENST00000412287 913 ntBASIC4.67□□□□□ -1.66
HADHAP40939 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.67□□□□□ -1.66
HADHAP40939 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.67□□□□□ -1.66
HADHAP40939 AC004074.1-201ENST00000421810 1063 ntBASIC4.67□□□□□ -1.66
HADHAP40939 RPL21P43-201ENST00000425440 472 ntBASIC4.67□□□□□ -1.66
HADHAP40939 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.67□□□□□ -1.66
HADHAP40939 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.67□□□□□ -1.66
HADHAP40939 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.67□□□□□ -1.66
HADHAP40939 AL513533.1-201ENST00000453728 415 ntBASIC4.67□□□□□ -1.66
HADHAP40939 AC012158.1-204ENST00000483430 465 ntBASIC4.67□□□□□ -1.66
HADHAP40939 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.67□□□□□ -1.66
HADHAP40939 PRELID3BP7-201ENST00000503606 469 ntBASIC4.67□□□□□ -1.66
HADHAP40939 AC083829.1-201ENST00000503756 657 ntBASIC4.67□□□□□ -1.66
HADHAP40939 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.67□□□□□ -1.66
HADHAP40939 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.67□□□□□ -1.66
HADHAP40939 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HADHAP40939 HIGD1AP5-201ENST00000529959 259 ntBASIC4.67□□□□□ -1.66
HADHAP40939 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.67□□□□□ -1.66
HADHAP40939 RN7SL176P-201ENST00000580352 264 ntBASIC4.67□□□□□ -1.66
HADHAP40939 AC091178.1-203ENST00000584586 279 ntBASIC4.67□□□□□ -1.66
HADHAP40939 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.67□□□□□ -1.66
HADHAP40939 AC005191.1-201ENST00000603950 358 ntBASIC4.67□□□□□ -1.66
HADHAP40939 AC010680.3-201ENST00000604215 520 ntBASIC4.67□□□□□ -1.66
HADHAP40939 AC098935.2-201ENST00000604222 466 ntBASIC4.67□□□□□ -1.66
HADHAP40939 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.67□□□□□ -1.66
HADHAP40939 uc_338.18-201ENST00000615451 175 ntBASIC4.67□□□□□ -1.66
HADHAP40939 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.67□□□□□ -1.66
HADHAP40939 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.67□□□□□ -1.66
HADHAP40939 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HADHAP40939 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
HADHAP40939 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HADHAP40939 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HADHAP40939 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.67□□□□□ -1.66
HADHAP40939 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HADHAP40939 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HADHAP40939 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 AC006971.1-201ENST00000407916 4486 ntBASIC4.66□□□□□ -1.66
HADHAP40939 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
HADHAP40939 AC011978.2-201ENST00000569835 2054 ntBASIC4.66□□□□□ -1.66
HADHAP40939 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.66□□□□□ -1.66
HADHAP40939 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.66□□□□□ -1.66
HADHAP40939 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
HADHAP40939 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 OR10J6P-201ENST00000289731 930 ntBASIC4.66□□□□□ -1.66
HADHAP40939 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
HADHAP40939 SNORA71.2-201ENST00000364941 134 ntBASIC4.66□□□□□ -1.66
HADHAP40939 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HADHAP40939 MTCO1P56-201ENST00000401674 224 ntBASIC4.66□□□□□ -1.66
HADHAP40939 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.66□□□□□ -1.66
HADHAP40939 MTND4P3-201ENST00000417829 541 ntBASIC4.66□□□□□ -1.66
HADHAP40939 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.66□□□□□ -1.66
HADHAP40939 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 PDSS1P1-201ENST00000422953 1114 ntBASIC4.66□□□□□ -1.66
HADHAP40939 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.66□□□□□ -1.66
HADHAP40939 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.66□□□□□ -1.66
HADHAP40939 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.66□□□□□ -1.66
HADHAP40939 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.66□□□□□ -1.66
HADHAP40939 AL358794.1-201ENST00000445689 381 ntBASIC4.66□□□□□ -1.66
HADHAP40939 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.66□□□□□ -1.66
HADHAP40939 AC006967.1-201ENST00000467608 589 ntBASIC4.66□□□□□ -1.66
HADHAP40939 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.66□□□□□ -1.66
HADHAP40939 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.66□□□□□ -1.66
HADHAP40939 PRDX3P4-201ENST00000470828 747 ntBASIC4.66□□□□□ -1.66
HADHAP40939 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.66□□□□□ -1.66
HADHAP40939 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.66□□□□□ -1.66
HADHAP40939 RNU2-30P-201ENST00000516209 141 ntBASIC4.66□□□□□ -1.66
HADHAP40939 AC090151.1-201ENST00000520784 730 ntBASIC4.66□□□□□ -1.66
HADHAP40939 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.66□□□□□ -1.66
HADHAP40939 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.66□□□□□ -1.66
HADHAP40939 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.66□□□□□ -1.66
HADHAP40939 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.66□□□□□ -1.66
HADHAP40939 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.66□□□□□ -1.66
HADHAP40939 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.66□□□□□ -1.66
HADHAP40939 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.66□□□□□ -1.66
HADHAP40939 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.66□□□□□ -1.66
HADHAP40939 AP005119.2-201ENST00000579735 1105 ntBASIC4.66□□□□□ -1.66
HADHAP40939 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.66□□□□□ -1.66
HADHAP40939 AC008759.1-201ENST00000589783 983 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms