Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HMGCLP35914 AC007599.1-201ENST00000568688 1174 ntBASIC4.09□□□□□ -1.75
HMGCLP35914 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.09□□□□□ -1.75
HMGCLP35914 RPL23AP87-202ENST00000573039 466 ntBASIC4.09□□□□□ -1.75
HMGCLP35914 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.09□□□□□ -1.75
HMGCLP35914 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.09□□□□□ -1.75
HMGCLP35914 MIR5684-201ENST00000585074 65 ntBASIC4.09□□□□□ -1.75
HMGCLP35914 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HMGCLP35914 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HMGCLP35914 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGCLP35914 AC010680.3-201ENST00000604215 520 ntBASIC4.09□□□□□ -1.75
HMGCLP35914 AC104662.1-201ENST00000604448 511 ntBASIC4.09□□□□□ -1.75
HMGCLP35914 AP001033.2-201ENST00000609701 1003 ntBASIC4.09□□□□□ -1.75
HMGCLP35914 AC090246.1-201ENST00000616499 426 ntBASIC4.09□□□□□ -1.75
HMGCLP35914 AL356274.1-201ENST00000617064 410 ntBASIC4.09□□□□□ -1.75
HMGCLP35914 AC006249.1-201ENST00000621223 471 ntBASIC4.09□□□□□ -1.75
HMGCLP35914 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.09□□□□□ -1.75
HMGCLP35914 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HMGCLP35914 OR5AC4P-202ENST00000642086 985 ntBASIC4.09□□□□□ -1.75
HMGCLP35914 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HMGCLP35914 ZNF90P1-201ENST00000480493 1951 ntBASIC4.09□□□□□ -1.76
HMGCLP35914 AC007529.1-201ENST00000418574 2178 ntBASIC4.09□□□□□ -1.76
HMGCLP35914 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HMGCLP35914 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
HMGCLP35914 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCLP35914 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
HMGCLP35914 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCLP35914 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCLP35914 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGCLP35914 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCLP35914 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCLP35914 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCLP35914 RNU11-4P-201ENST00000391149 133 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 AL022722.2-201ENST00000402519 180 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 PTGES3P2-201ENST00000407942 482 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.08□□□□□ -1.76
HMGCLP35914 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.08□□□□□ -1.76
HMGCLP35914 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGCLP35914 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGCLP35914 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGCLP35914 UBE2V1P6-201ENST00000430840 422 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 SDR42E1P3-201ENST00000438345 502 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGCLP35914 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGCLP35914 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.08□□□□□ -1.76
HMGCLP35914 RPL7P31-201ENST00000450192 724 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 RN7SL385P-201ENST00000468873 276 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HMGCLP35914 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
HMGCLP35914 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGCLP35914 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.08□□□□□ -1.76
HMGCLP35914 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGCLP35914 HNRNPKP5-201ENST00000515300 253 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 UBTFL9-201ENST00000534504 1148 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.08□□□□□ -1.76
HMGCLP35914 AC093014.1-201ENST00000548926 724 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.08□□□□□ -1.76
HMGCLP35914 AC007424.1-203ENST00000554613 687 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.08□□□□□ -1.76
HMGCLP35914 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.08□□□□□ -1.76
HMGCLP35914 AC136624.4-201ENST00000573044 370 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 AC012417.1-201ENST00000582307 1039 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 CBX3P2-202ENST00000583365 535 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGCLP35914 AC098483.2-201ENST00000603158 454 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 AC005776.1-201ENST00000603164 290 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 AC008725.1-201ENST00000605123 2263 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGCLP35914 AC084824.5-201ENST00000612009 413 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 AC023043.4-201ENST00000612081 449 ntBASIC4.08□□□□□ -1.76
HMGCLP35914 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGCLP35914 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCLP35914 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HMGCLP35914 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HMGCLP35914 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HMGCLP35914 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCLP35914 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
HMGCLP35914 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HMGCLP35914 MARK2P15-201ENST00000432204 2186 ntBASIC4.07□□□□□ -1.76
HMGCLP35914 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
HMGCLP35914 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGCLP35914 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCLP35914 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCLP35914 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCLP35914 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGCLP35914 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGCLP35914 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCLP35914 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HMGCLP35914 AL121657.1-201ENST00000327215 531 ntBASIC4.07□□□□□ -1.76
HMGCLP35914 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HMGCLP35914 RNU6-252P-201ENST00000363232 107 ntBASIC4.07□□□□□ -1.76
HMGCLP35914 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCLP35914 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCLP35914 OR8G2P-201ENST00000412796 908 ntBASIC4.07□□□□□ -1.76
HMGCLP35914 TPT1P2-201ENST00000413105 503 ntBASIC4.07□□□□□ -1.76
HMGCLP35914 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.07□□□□□ -1.76
HMGCLP35914 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCLP35914 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.07□□□□□ -1.76
HMGCLP35914 RSL24D1P6-201ENST00000426934 401 ntBASIC4.07□□□□□ -1.76
HMGCLP35914 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms