Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CIITAP33076 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CIITAP33076 MFSD8-242ENST00000641690 4199 ntBASIC5.03□□□□□ -1.6
CIITAP33076 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.03□□□□□ -1.6
CIITAP33076 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CIITAP33076 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CIITAP33076 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CIITAP33076 SNORA62.2-201ENST00000364672 152 ntBASIC5.03□□□□□ -1.6
CIITAP33076 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CIITAP33076 MIR141-201ENST00000384975 95 ntBASIC5.03□□□□□ -1.6
CIITAP33076 AP000357.1-201ENST00000409926 1165 ntBASIC5.03□□□□□ -1.6
CIITAP33076 SNORA74C-2-201ENST00000411179 201 ntBASIC5.03□□□□□ -1.6
CIITAP33076 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.03□□□□□ -1.6
CIITAP33076 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.03□□□□□ -1.6
CIITAP33076 AC012519.1-201ENST00000424588 610 ntBASIC5.03□□□□□ -1.6
CIITAP33076 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.03□□□□□ -1.6
CIITAP33076 PPIAP13-201ENST00000434706 478 ntBASIC5.03□□□□□ -1.6
CIITAP33076 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.03□□□□□ -1.6
CIITAP33076 MTND2P22-201ENST00000444325 1033 ntBASIC5.03□□□□□ -1.6
CIITAP33076 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.03□□□□□ -1.6
CIITAP33076 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.03□□□□□ -1.6
CIITAP33076 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CIITAP33076 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.03□□□□□ -1.6
CIITAP33076 AL122001.1-201ENST00000457027 370 ntBASIC5.03□□□□□ -1.6
CIITAP33076 RPL23AP24-201ENST00000458203 385 ntBASIC5.03□□□□□ -1.6
CIITAP33076 RN7SL98P-201ENST00000462271 300 ntBASIC5.03□□□□□ -1.6
CIITAP33076 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.03□□□□□ -1.6
CIITAP33076 RN7SL810P-201ENST00000493031 276 ntBASIC5.03□□□□□ -1.6
CIITAP33076 AC005912.1-201ENST00000495392 255 ntBASIC5.03□□□□□ -1.6
CIITAP33076 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.03□□□□□ -1.6
CIITAP33076 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.03□□□□□ -1.6
CIITAP33076 RNA5SP497-201ENST00000516081 97 ntBASIC5.03□□□□□ -1.6
CIITAP33076 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.03□□□□□ -1.6
CIITAP33076 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.03□□□□□ -1.6
CIITAP33076 NDUFS5P6-201ENST00000529136 295 ntBASIC5.03□□□□□ -1.6
CIITAP33076 AC009643.1-201ENST00000532030 391 ntBASIC5.03□□□□□ -1.6
CIITAP33076 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CIITAP33076 AC091515.1-201ENST00000548110 679 ntBASIC5.03□□□□□ -1.6
CIITAP33076 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.03□□□□□ -1.6
CIITAP33076 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.03□□□□□ -1.6
CIITAP33076 NPM1P47-201ENST00000560843 856 ntBASIC5.03□□□□□ -1.6
CIITAP33076 AC145350.1-201ENST00000567426 208 ntBASIC5.03□□□□□ -1.6
CIITAP33076 MTND3P13-201ENST00000574391 343 ntBASIC5.03□□□□□ -1.6
CIITAP33076 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CIITAP33076 AC103792.1-201ENST00000603591 919 ntBASIC5.03□□□□□ -1.6
CIITAP33076 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.03□□□□□ -1.6
CIITAP33076 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.03□□□□□ -1.6
CIITAP33076 AC140113.4-201ENST00000622087 222 ntBASIC5.03□□□□□ -1.6
CIITAP33076 AC005086.4-201ENST00000623065 213 ntBASIC5.03□□□□□ -1.6
CIITAP33076 AC015908.5-201ENST00000623289 343 ntBASIC5.03□□□□□ -1.6
CIITAP33076 BX649567.1-201ENST00000642071 1134 ntBASIC5.03□□□□□ -1.6
CIITAP33076 AC025031.4-201ENST00000621248 3271 ntBASIC5.03□□□□□ -1.6
CIITAP33076 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CIITAP33076 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CIITAP33076 NOL8P1-201ENST00000508336 3529 ntBASIC5.03□□□□□ -1.6
CIITAP33076 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CIITAP33076 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.03□□□□□ -1.6
CIITAP33076 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CIITAP33076 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.03□□□□□ -1.6
CIITAP33076 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.03□□□□□ -1.6
CIITAP33076 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CIITAP33076 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CIITAP33076 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CIITAP33076 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CIITAP33076 AC093535.2-201ENST00000624769 2326 ntBASIC5.02□□□□□ -1.61
CIITAP33076 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.02□□□□□ -1.61
CIITAP33076 AC010300.1-201ENST00000600671 5134 ntBASIC5.02□□□□□ -1.61
CIITAP33076 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CIITAP33076 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CIITAP33076 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CIITAP33076 EOGT-210ENST00000615922 1931 ntBASIC5.02□□□□□ -1.61
CIITAP33076 AC006971.1-201ENST00000407916 4486 ntBASIC5.02□□□□□ -1.61
CIITAP33076 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CIITAP33076 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CIITAP33076 RNA5SP307-201ENST00000362863 116 ntBASIC5.02□□□□□ -1.61
CIITAP33076 RN7SKP224-201ENST00000364140 325 ntBASIC5.02□□□□□ -1.61
CIITAP33076 RNY3P9-201ENST00000384727 106 ntBASIC5.02□□□□□ -1.61
CIITAP33076 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
CIITAP33076 AC119751.3-201ENST00000399720 670 ntBASIC5.02□□□□□ -1.61
CIITAP33076 SNORA11F-201ENST00000408237 128 ntBASIC5.02□□□□□ -1.61
CIITAP33076 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.02□□□□□ -1.61
CIITAP33076 MTCO3P4-201ENST00000419236 787 ntBASIC5.02□□□□□ -1.61
CIITAP33076 RPS26P47-201ENST00000427219 348 ntBASIC5.02□□□□□ -1.61
CIITAP33076 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.02□□□□□ -1.61
CIITAP33076 RPS29P17-201ENST00000430795 166 ntBASIC5.02□□□□□ -1.61
CIITAP33076 AC016712.1-201ENST00000431088 378 ntBASIC5.02□□□□□ -1.61
CIITAP33076 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.02□□□□□ -1.61
CIITAP33076 UBE2V1P3-201ENST00000439651 417 ntBASIC5.02□□□□□ -1.61
CIITAP33076 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CIITAP33076 OR51B8P-201ENST00000449892 769 ntBASIC5.02□□□□□ -1.61
CIITAP33076 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.02□□□□□ -1.61
CIITAP33076 PPIAP21-201ENST00000464473 501 ntBASIC5.02□□□□□ -1.61
CIITAP33076 RPL23AP65-201ENST00000475608 468 ntBASIC5.02□□□□□ -1.61
CIITAP33076 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CIITAP33076 CEACAMP10-202ENST00000495431 496 ntBASIC5.02□□□□□ -1.61
CIITAP33076 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.02□□□□□ -1.61
CIITAP33076 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.02□□□□□ -1.61
CIITAP33076 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.02□□□□□ -1.61
CIITAP33076 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.02□□□□□ -1.61
CIITAP33076 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms