Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CLIP1P30622 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLIP1P30622 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLIP1P30622 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLIP1P30622 OR6K3-202ENST00000368146 996 ntBASIC5.74□□□□□ -1.49
CLIP1P30622 NDUFB4P4-201ENST00000404822 243 ntBASIC5.74□□□□□ -1.49
CLIP1P30622 AC010655.1-201ENST00000449336 292 ntBASIC5.74□□□□□ -1.49
CLIP1P30622 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.74□□□□□ -1.49
CLIP1P30622 AL355365.1-201ENST00000616480 294 ntBASIC5.74□□□□□ -1.49
CLIP1P30622 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.74□□□□□ -1.49
CLIP1P30622 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLIP1P30622 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLIP1P30622 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLIP1P30622 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CLIP1P30622 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CLIP1P30622 MTHFD2P2-201ENST00000407725 247 ntBASIC5.74□□□□□ -1.49
CLIP1P30622 RN7SKP177-201ENST00000410567 355 ntBASIC5.74□□□□□ -1.49
CLIP1P30622 AC073063.1-201ENST00000434352 607 ntBASIC5.74□□□□□ -1.49
CLIP1P30622 AC092447.2-201ENST00000435487 669 ntBASIC5.74□□□□□ -1.49
CLIP1P30622 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.74□□□□□ -1.49
CLIP1P30622 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
CLIP1P30622 HMGB3P13-201ENST00000511263 607 ntBASIC5.74□□□□□ -1.49
CLIP1P30622 SCARNA13-201ENST00000516672 275 ntBASIC5.74□□□□□ -1.49
CLIP1P30622 AC103843.2-201ENST00000530523 682 ntBASIC5.74□□□□□ -1.49
CLIP1P30622 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.74□□□□□ -1.49
CLIP1P30622 KLKP1-201ENST00000595979 403 ntBASIC5.74□□□□□ -1.49
CLIP1P30622 AC069209.1-201ENST00000619282 651 ntBASIC5.74□□□□□ -1.49
CLIP1P30622 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.74□□□□□ -1.49
CLIP1P30622 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP1P30622 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP1P30622 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP1P30622 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP1P30622 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CLIP1P30622 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CLIP1P30622 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CLIP1P30622 AC007685.1-201ENST00000329806 452 ntBASIC5.73□□□□□ -1.49
CLIP1P30622 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP1P30622 OR52E6-202ENST00000379946 954 ntBASIC5.73□□□□□ -1.49
CLIP1P30622 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.73□□□□□ -1.49
CLIP1P30622 RN7SKP53-201ENST00000411337 315 ntBASIC5.73□□□□□ -1.49
CLIP1P30622 Z92545.1-201ENST00000411782 234 ntBASIC5.73□□□□□ -1.49
CLIP1P30622 IFNNP1-201ENST00000429219 553 ntBASIC5.73□□□□□ -1.49
CLIP1P30622 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.73□□□□□ -1.49
CLIP1P30622 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.73□□□□□ -1.49
CLIP1P30622 AC006272.2-201ENST00000594725 163 ntBASIC5.73□□□□□ -1.49
CLIP1P30622 MIR486-1-201ENST00000612171 68 ntBASIC5.73□□□□□ -1.49
CLIP1P30622 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLIP1P30622 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLIP1P30622 AL079305.1-201ENST00000623159 3008 ntBASIC5.72□□□□□ -1.49
CLIP1P30622 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CLIP1P30622 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CLIP1P30622 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
CLIP1P30622 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLIP1P30622 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLIP1P30622 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC5.72□□□□□ -1.49
CLIP1P30622 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLIP1P30622 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CLIP1P30622 MTND2P11-201ENST00000423638 648 ntBASIC5.72□□□□□ -1.49
CLIP1P30622 RPS4XP10-201ENST00000465034 731 ntBASIC5.72□□□□□ -1.49
CLIP1P30622 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP1P30622 RNU6-579P-201ENST00000516879 102 ntBASIC5.72□□□□□ -1.49
CLIP1P30622 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.72□□□□□ -1.49
CLIP1P30622 OR1AB1P-201ENST00000585564 761 ntBASIC5.72□□□□□ -1.49
CLIP1P30622 AC010591.1-201ENST00000603941 649 ntBASIC5.72□□□□□ -1.49
CLIP1P30622 BRDTP1-201ENST00000605735 677 ntBASIC5.72□□□□□ -1.49
CLIP1P30622 AC097634.1-201ENST00000604491 2467 ntBASIC5.72□□□□□ -1.49
CLIP1P30622 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLIP1P30622 NAMPTP1-201ENST00000440465 2514 ntBASIC5.72□□□□□ -1.49
CLIP1P30622 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
CLIP1P30622 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLIP1P30622 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP1P30622 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP1P30622 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CLIP1P30622 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.71□□□□□ -1.5
CLIP1P30622 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CLIP1P30622 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP1P30622 HMGN2P8-201ENST00000391458 268 ntBASIC5.71□□□□□ -1.5
CLIP1P30622 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.71□□□□□ -1.5
CLIP1P30622 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC5.71□□□□□ -1.5
CLIP1P30622 CYCSP32-201ENST00000440548 321 ntBASIC5.71□□□□□ -1.5
CLIP1P30622 AC026784.1-201ENST00000507986 352 ntBASIC5.71□□□□□ -1.5
CLIP1P30622 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.71□□□□□ -1.5
CLIP1P30622 AC107016.1-201ENST00000550463 337 ntBASIC5.71□□□□□ -1.5
CLIP1P30622 AC023389.2-201ENST00000580031 955 ntBASIC5.71□□□□□ -1.5
CLIP1P30622 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.71□□□□□ -1.5
CLIP1P30622 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLIP1P30622 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLIP1P30622 AC007656.2-201ENST00000624902 4547 ntBASIC5.7□□□□□ -1.5
CLIP1P30622 AC090337.1-201ENST00000579651 2074 ntBASIC5.7□□□□□ -1.5
CLIP1P30622 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CLIP1P30622 RNA5SP50-201ENST00000363731 107 ntBASIC5.7□□□□□ -1.5
CLIP1P30622 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLIP1P30622 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.7□□□□□ -1.5
CLIP1P30622 AL121834.1-202ENST00000404494 277 ntBASIC5.7□□□□□ -1.5
CLIP1P30622 OSTCP5-201ENST00000425293 453 ntBASIC5.7□□□□□ -1.5
CLIP1P30622 AC097713.2-201ENST00000430199 356 ntBASIC5.7□□□□□ -1.5
CLIP1P30622 YWHAEP5-201ENST00000431545 765 ntBASIC5.7□□□□□ -1.5
CLIP1P30622 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.7□□□□□ -1.5
CLIP1P30622 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.7□□□□□ -1.5
CLIP1P30622 ASNSP4-201ENST00000511103 447 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms