Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.89□□□□□ -1.47
COL8A1P27658 RN7SL797P-201ENST00000486314 297 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.89□□□□□ -1.47
COL8A1P27658 AC131392.1-201ENST00000506490 633 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 AC138866.2-201ENST00000508650 584 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 SNORD46.2-201ENST00000516021 102 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 Y_RNA.673-201ENST00000516306 88 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 RN7SKP219-201ENST00000516825 296 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 RNU6-1212P-201ENST00000517023 104 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 RN7SKP147-201ENST00000517154 244 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 SNORD116.3-201ENST00000517176 78 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 RNU6-111P-201ENST00000517179 105 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.89□□□□□ -1.47
COL8A1P27658 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.89□□□□□ -1.47
COL8A1P27658 AP001804.2-201ENST00000533932 910 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.89□□□□□ -1.47
COL8A1P27658 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.89□□□□□ -1.47
COL8A1P27658 AC079905.1-201ENST00000549280 475 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL8A1P27658 DPPA3P2-201ENST00000553589 478 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.89□□□□□ -1.47
COL8A1P27658 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.89□□□□□ -1.47
COL8A1P27658 AC092718.4-201ENST00000566639 716 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.89□□□□□ -1.47
COL8A1P27658 MIR4424-201ENST00000585257 86 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.89□□□□□ -1.47
COL8A1P27658 AL031176.1-201ENST00000604554 466 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 AC022467.1-201ENST00000614738 749 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 AC145207.9-201ENST00000623802 325 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 AC127459.3-201ENST00000624328 466 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.89□□□□□ -1.47
COL8A1P27658 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.89□□□□□ -1.47
COL8A1P27658 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.89□□□□□ -1.47
COL8A1P27658 AC008013.2-202ENST00000637965 364 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
COL8A1P27658 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
COL8A1P27658 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL8A1P27658 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL8A1P27658 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC5.89□□□□□ -1.47
COL8A1P27658 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL8A1P27658 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.89□□□□□ -1.47
COL8A1P27658 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
COL8A1P27658 AC097504.1-201ENST00000515103 2415 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC5.89□□□□□ -1.47
COL8A1P27658 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL8A1P27658 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC5.89□□□□□ -1.47
COL8A1P27658 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL8A1P27658 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.89□□□□□ -1.47
COL8A1P27658 SALL4P7-201ENST00000555779 3120 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL8A1P27658 AC009831.5-201ENST00000624000 3189 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL8A1P27658 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.89□□□□□ -1.47
COL8A1P27658 AC121333.1-201ENST00000567488 2709 ntBASIC5.89□□□□□ -1.47
COL8A1P27658 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
COL8A1P27658 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL8A1P27658 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC5.89□□□□□ -1.47
COL8A1P27658 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.89□□□□□ -1.47
COL8A1P27658 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL8A1P27658 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL8A1P27658 AC011416.1-201ENST00000514947 1732 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.88□□□□□ -1.47
COL8A1P27658 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
COL8A1P27658 AC022819.1-201ENST00000563495 3910 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.88□□□□□ -1.47
COL8A1P27658 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL8A1P27658 AC046144.1-201ENST00000478559 1853 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL8A1P27658 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL8A1P27658 AC091812.1-201ENST00000432235 1948 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL8A1P27658 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
COL8A1P27658 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL8A1P27658 RNA5SP242-201ENST00000364171 118 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 RNU6-740P-201ENST00000364734 105 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 RNU1-84P-201ENST00000365447 164 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 RNU6-1093P-201ENST00000391194 107 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL8A1P27658 AL359694.1-201ENST00000403247 604 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.88□□□□□ -1.47
COL8A1P27658 AC078974.1-201ENST00000411597 223 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 RPS15AP10-201ENST00000432472 382 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.88□□□□□ -1.47
COL8A1P27658 NXT1P1-201ENST00000458481 316 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 RNU7-136P-201ENST00000458819 69 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 AC096922.1-201ENST00000461635 651 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 RPS26P39-201ENST00000469206 341 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 RPL5P22-201ENST00000480199 884 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.88□□□□□ -1.47
COL8A1P27658 PSMA2P2-201ENST00000504319 686 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.88□□□□□ -1.47
COL8A1P27658 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.88□□□□□ -1.47
COL8A1P27658 AP006245.2-201ENST00000522004 300 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC5.88□□□□□ -1.47
COL8A1P27658 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.88□□□□□ -1.47
COL8A1P27658 AC068993.1-201ENST00000546724 589 ntBASIC5.88□□□□□ -1.47
COL8A1P27658 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
COL8A1P27658 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms