Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.56□□□□□ -1.84
USF1P22415 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
USF1P22415 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.56□□□□□ -1.84
USF1P22415 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.56□□□□□ -1.84
USF1P22415 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USF1P22415 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
USF1P22415 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.56□□□□□ -1.84
USF1P22415 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.56□□□□□ -1.84
USF1P22415 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
USF1P22415 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USF1P22415 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
USF1P22415 RNA5SP130-201ENST00000364431 114 ntBASIC3.56□□□□□ -1.84
USF1P22415 SNORA62.2-201ENST00000364672 152 ntBASIC3.56□□□□□ -1.84
USF1P22415 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USF1P22415 MIR93-201ENST00000385024 80 ntBASIC3.56□□□□□ -1.84
USF1P22415 AC097374.1-203ENST00000400783 485 ntBASIC3.56□□□□□ -1.84
USF1P22415 VN1R8P-201ENST00000407739 893 ntBASIC3.56□□□□□ -1.84
USF1P22415 RNA5SP239-201ENST00000410218 129 ntBASIC3.56□□□□□ -1.84
USF1P22415 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.56□□□□□ -1.84
USF1P22415 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.56□□□□□ -1.84
USF1P22415 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.56□□□□□ -1.84
USF1P22415 RPL23AP46-201ENST00000438548 490 ntBASIC3.56□□□□□ -1.84
USF1P22415 RPL34P26-201ENST00000445636 354 ntBASIC3.56□□□□□ -1.84
USF1P22415 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USF1P22415 TPMTP4-201ENST00000450749 678 ntBASIC3.56□□□□□ -1.84
USF1P22415 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.56□□□□□ -1.84
USF1P22415 AC092045.1-201ENST00000495716 1231 ntBASIC3.56□□□□□ -1.84
USF1P22415 AC023050.1-201ENST00000498198 304 ntBASIC3.56□□□□□ -1.84
USF1P22415 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.56□□□□□ -1.84
USF1P22415 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.56□□□□□ -1.84
USF1P22415 AC108157.1-201ENST00000510511 539 ntBASIC3.56□□□□□ -1.84
USF1P22415 AC108064.1-201ENST00000513791 460 ntBASIC3.56□□□□□ -1.84
USF1P22415 RNA5SP73-201ENST00000516744 108 ntBASIC3.56□□□□□ -1.84
USF1P22415 RNU6-889P-201ENST00000517189 103 ntBASIC3.56□□□□□ -1.84
USF1P22415 IGLVIV-53-201ENST00000520107 367 ntBASIC3.56□□□□□ -1.84
USF1P22415 AC069240.1-201ENST00000548774 375 ntBASIC3.56□□□□□ -1.84
USF1P22415 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.56□□□□□ -1.84
USF1P22415 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.56□□□□□ -1.84
USF1P22415 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.56□□□□□ -1.84
USF1P22415 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.56□□□□□ -1.84
USF1P22415 AC053481.4-201ENST00000583164 216 ntBASIC3.56□□□□□ -1.84
USF1P22415 AL354984.3-201ENST00000604803 325 ntBASIC3.56□□□□□ -1.84
USF1P22415 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.56□□□□□ -1.84
USF1P22415 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USF1P22415 uc_338.32-201ENST00000615087 172 ntBASIC3.56□□□□□ -1.84
USF1P22415 MIR6875-201ENST00000617506 72 ntBASIC3.56□□□□□ -1.84
USF1P22415 AC009032.1-201ENST00000617574 431 ntBASIC3.56□□□□□ -1.84
USF1P22415 AL445363.3-201ENST00000623080 671 ntBASIC3.56□□□□□ -1.84
USF1P22415 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.56□□□□□ -1.84
USF1P22415 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.56□□□□□ -1.84
USF1P22415 AC105074.1-201ENST00000623380 3095 ntBASIC3.56□□□□□ -1.84
USF1P22415 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USF1P22415 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USF1P22415 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USF1P22415 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
USF1P22415 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.56□□□□□ -1.84
USF1P22415 Z82217.1-201ENST00000625157 8149 ntBASIC3.55□□□□□ -1.84
USF1P22415 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.55□□□□□ -1.84
USF1P22415 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
USF1P22415 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
USF1P22415 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.55□□□□□ -1.84
USF1P22415 SNORD74.4-201ENST00000364129 80 ntBASIC3.55□□□□□ -1.84
USF1P22415 MIR513A2-201ENST00000385249 127 ntBASIC3.55□□□□□ -1.84
USF1P22415 AL583835.1-201ENST00000399570 407 ntBASIC3.55□□□□□ -1.84
USF1P22415 RPL21P65-201ENST00000406094 466 ntBASIC3.55□□□□□ -1.84
USF1P22415 RPS23P10-201ENST00000416185 486 ntBASIC3.55□□□□□ -1.84
USF1P22415 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.55□□□□□ -1.84
USF1P22415 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.55□□□□□ -1.84
USF1P22415 CYP4F29P-201ENST00000420685 446 ntBASIC3.55□□□□□ -1.84
USF1P22415 AL389915.1-201ENST00000422463 466 ntBASIC3.55□□□□□ -1.84
USF1P22415 HMGB3P5-201ENST00000428894 612 ntBASIC3.55□□□□□ -1.84
USF1P22415 AL353748.1-201ENST00000440753 474 ntBASIC3.55□□□□□ -1.84
USF1P22415 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.55□□□□□ -1.84
USF1P22415 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.55□□□□□ -1.84
USF1P22415 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.55□□□□□ -1.84
USF1P22415 AC091959.2-201ENST00000477363 321 ntBASIC3.55□□□□□ -1.84
USF1P22415 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.55□□□□□ -1.84
USF1P22415 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.55□□□□□ -1.84
USF1P22415 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.55□□□□□ -1.84
USF1P22415 AC006499.6-201ENST00000511169 607 ntBASIC3.55□□□□□ -1.84
USF1P22415 RNU6-760P-201ENST00000516078 97 ntBASIC3.55□□□□□ -1.84
USF1P22415 RNU1-45P-201ENST00000517191 141 ntBASIC3.55□□□□□ -1.84
USF1P22415 PHBP17-201ENST00000528576 541 ntBASIC3.55□□□□□ -1.84
USF1P22415 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.55□□□□□ -1.84
USF1P22415 RFPL1S-203ENST00000539579 330 ntBASIC3.55□□□□□ -1.84
USF1P22415 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.55□□□□□ -1.84
USF1P22415 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.55□□□□□ -1.84
USF1P22415 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.55□□□□□ -1.84
USF1P22415 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.55□□□□□ -1.84
USF1P22415 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.55□□□□□ -1.84
USF1P22415 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.55□□□□□ -1.84
USF1P22415 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.55□□□□□ -1.84
USF1P22415 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.55□□□□□ -1.84
USF1P22415 AC245128.3-201ENST00000594721 748 ntBASIC3.55□□□□□ -1.84
USF1P22415 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.55□□□□□ -1.84
USF1P22415 AL160290.3-201ENST00000604869 165 ntBASIC3.55□□□□□ -1.84
USF1P22415 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
USF1P22415 CR392039.4-201ENST00000624968 501 ntBASIC3.55□□□□□ -1.84
USF1P22415 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.55□□□□□ -1.84
USF1P22415 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms