Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.27□□□□□ -1.89
CCL1P22362 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.27□□□□□ -1.89
CCL1P22362 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCL1P22362 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CCL1P22362 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CCL1P22362 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.27□□□□□ -1.89
CCL1P22362 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
CCL1P22362 AC007529.1-201ENST00000418574 2178 ntBASIC3.27□□□□□ -1.89
CCL1P22362 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.26□□□□□ -1.89
CCL1P22362 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.26□□□□□ -1.89
CCL1P22362 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
CCL1P22362 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.26□□□□□ -1.89
CCL1P22362 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCL1P22362 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCL1P22362 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.26□□□□□ -1.89
CCL1P22362 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCL1P22362 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CCL1P22362 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCL1P22362 RNU6-1251P-201ENST00000364502 107 ntBASIC3.26□□□□□ -1.89
CCL1P22362 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCL1P22362 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCL1P22362 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCL1P22362 SNORA70C-201ENST00000384538 135 ntBASIC3.26□□□□□ -1.89
CCL1P22362 RNA5SP424-201ENST00000390988 115 ntBASIC3.26□□□□□ -1.89
CCL1P22362 RNA5SP317-201ENST00000410176 116 ntBASIC3.26□□□□□ -1.89
CCL1P22362 RNA5SP311-201ENST00000411290 116 ntBASIC3.26□□□□□ -1.89
CCL1P22362 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.26□□□□□ -1.89
CCL1P22362 RPL7P28-201ENST00000437739 740 ntBASIC3.26□□□□□ -1.89
CCL1P22362 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.26□□□□□ -1.89
CCL1P22362 TPT1P13-201ENST00000449760 499 ntBASIC3.26□□□□□ -1.89
CCL1P22362 AC005229.2-201ENST00000456995 399 ntBASIC3.26□□□□□ -1.89
CCL1P22362 RPS7P7-201ENST00000463499 571 ntBASIC3.26□□□□□ -1.89
CCL1P22362 AC006463.2-201ENST00000473326 348 ntBASIC3.26□□□□□ -1.89
CCL1P22362 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.26□□□□□ -1.89
CCL1P22362 RPS4XP15-201ENST00000489210 795 ntBASIC3.26□□□□□ -1.89
CCL1P22362 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.26□□□□□ -1.89
CCL1P22362 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.26□□□□□ -1.89
CCL1P22362 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.26□□□□□ -1.89
CCL1P22362 RNA5SP315-201ENST00000516340 116 ntBASIC3.26□□□□□ -1.89
CCL1P22362 RNA5SP312-201ENST00000517068 116 ntBASIC3.26□□□□□ -1.89
CCL1P22362 IGLVIV-53-201ENST00000520107 367 ntBASIC3.26□□□□□ -1.89
CCL1P22362 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.26□□□□□ -1.89
CCL1P22362 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.26□□□□□ -1.89
CCL1P22362 AP005901.4-201ENST00000577336 569 ntBASIC3.26□□□□□ -1.89
CCL1P22362 KLKP1-201ENST00000595979 403 ntBASIC3.26□□□□□ -1.89
CCL1P22362 MIR6500-201ENST00000622700 86 ntBASIC3.26□□□□□ -1.89
CCL1P22362 OR6C71P-202ENST00000641886 1107 ntBASIC3.26□□□□□ -1.89
CCL1P22362 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCL1P22362 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCL1P22362 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCL1P22362 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.26□□□□□ -1.89
CCL1P22362 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.26□□□□□ -1.89
CCL1P22362 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCL1P22362 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCL1P22362 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.25□□□□□ -1.89
CCL1P22362 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCL1P22362 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCL1P22362 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCL1P22362 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCL1P22362 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCL1P22362 RNU6-283P-201ENST00000364788 107 ntBASIC3.25□□□□□ -1.89
CCL1P22362 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.25□□□□□ -1.89
CCL1P22362 RNU6-213P-201ENST00000384051 104 ntBASIC3.25□□□□□ -1.89
CCL1P22362 AL391417.1-201ENST00000404100 426 ntBASIC3.25□□□□□ -1.89
CCL1P22362 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.25□□□□□ -1.89
CCL1P22362 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.25□□□□□ -1.89
CCL1P22362 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.25□□□□□ -1.89
CCL1P22362 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.25□□□□□ -1.89
CCL1P22362 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.25□□□□□ -1.89
CCL1P22362 AC114814.2-201ENST00000419195 485 ntBASIC3.25□□□□□ -1.89
CCL1P22362 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.25□□□□□ -1.89
CCL1P22362 MTCYBP29-201ENST00000436327 1006 ntBASIC3.25□□□□□ -1.89
CCL1P22362 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.25□□□□□ -1.89
CCL1P22362 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.25□□□□□ -1.89
CCL1P22362 AC099563.1-201ENST00000456086 418 ntBASIC3.25□□□□□ -1.89
CCL1P22362 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.25□□□□□ -1.89
CCL1P22362 FTH1P21-201ENST00000512179 511 ntBASIC3.25□□□□□ -1.89
CCL1P22362 RN7SKP122-201ENST00000515923 296 ntBASIC3.25□□□□□ -1.89
CCL1P22362 AC022790.1-201ENST00000522872 204 ntBASIC3.25□□□□□ -1.89
CCL1P22362 AC135001.1-201ENST00000544546 283 ntBASIC3.25□□□□□ -1.89
CCL1P22362 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.25□□□□□ -1.89
CCL1P22362 MIR4458-201ENST00000578872 75 ntBASIC3.25□□□□□ -1.89
CCL1P22362 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.25□□□□□ -1.89
CCL1P22362 AL139286.1-201ENST00000604465 483 ntBASIC3.25□□□□□ -1.89
CCL1P22362 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.25□□□□□ -1.89
CCL1P22362 AC006946.3-201ENST00000609791 756 ntBASIC3.25□□□□□ -1.89
CCL1P22362 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.25□□□□□ -1.89
CCL1P22362 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CCL1P22362 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.25□□□□□ -1.89
CCL1P22362 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CCL1P22362 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.25□□□□□ -1.89
CCL1P22362 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCL1P22362 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCL1P22362 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.24□□□□□ -1.89
CCL1P22362 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.24□□□□□ -1.89
CCL1P22362 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCL1P22362 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.24□□□□□ -1.89
CCL1P22362 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCL1P22362 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CCL1P22362 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms