Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.53□□□□□ -1.36
LMNB1P20700 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LMNB1P20700 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LMNB1P20700 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LMNB1P20700 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.53□□□□□ -1.36
LMNB1P20700 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LMNB1P20700 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
LMNB1P20700 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LMNB1P20700 RNF6P1-201ENST00000444889 1784 ntBASIC6.52□□□□□ -1.37
LMNB1P20700 AC005224.3-201ENST00000584683 2140 ntBASIC6.52□□□□□ -1.37
LMNB1P20700 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LMNB1P20700 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LMNB1P20700 RNA5SP88-201ENST00000365560 109 ntBASIC6.52□□□□□ -1.37
LMNB1P20700 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.52□□□□□ -1.37
LMNB1P20700 RNA5SP91-201ENST00000390902 119 ntBASIC6.52□□□□□ -1.37
LMNB1P20700 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.52□□□□□ -1.37
LMNB1P20700 Z97055.1-201ENST00000419730 712 ntBASIC6.52□□□□□ -1.37
LMNB1P20700 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.52□□□□□ -1.37
LMNB1P20700 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LMNB1P20700 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC6.52□□□□□ -1.37
LMNB1P20700 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.52□□□□□ -1.37
LMNB1P20700 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC6.52□□□□□ -1.37
LMNB1P20700 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.52□□□□□ -1.37
LMNB1P20700 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC6.52□□□□□ -1.37
LMNB1P20700 AC112206.1-201ENST00000468416 477 ntBASIC6.52□□□□□ -1.37
LMNB1P20700 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
LMNB1P20700 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC6.52□□□□□ -1.37
LMNB1P20700 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.52□□□□□ -1.37
LMNB1P20700 BTF3P13-201ENST00000513224 490 ntBASIC6.52□□□□□ -1.37
LMNB1P20700 MTCYBP43-201ENST00000513621 740 ntBASIC6.52□□□□□ -1.37
LMNB1P20700 RNU6-506P-201ENST00000516553 94 ntBASIC6.52□□□□□ -1.37
LMNB1P20700 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.52□□□□□ -1.37
LMNB1P20700 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC6.52□□□□□ -1.37
LMNB1P20700 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC6.52□□□□□ -1.37
LMNB1P20700 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
LMNB1P20700 UBE2FP2-201ENST00000566646 462 ntBASIC6.52□□□□□ -1.37
LMNB1P20700 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LMNB1P20700 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC6.52□□□□□ -1.37
LMNB1P20700 MIR4691-201ENST00000583764 85 ntBASIC6.52□□□□□ -1.37
LMNB1P20700 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC6.52□□□□□ -1.37
LMNB1P20700 AC145207.9-201ENST00000623802 325 ntBASIC6.52□□□□□ -1.37
LMNB1P20700 AL356596.1-201ENST00000624230 379 ntBASIC6.52□□□□□ -1.37
LMNB1P20700 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LMNB1P20700 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.52□□□□□ -1.37
LMNB1P20700 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LMNB1P20700 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LMNB1P20700 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LMNB1P20700 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.52□□□□□ -1.37
LMNB1P20700 AC073544.1-201ENST00000600110 1595 ntBASIC6.52□□□□□ -1.37
LMNB1P20700 AL078621.3-201ENST00000623707 2042 ntBASIC6.52□□□□□ -1.37
LMNB1P20700 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
LMNB1P20700 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LMNB1P20700 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LMNB1P20700 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LMNB1P20700 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
LMNB1P20700 SDAD1P1-202ENST00000524156 2051 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LMNB1P20700 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.51□□□□□ -1.37
LMNB1P20700 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LMNB1P20700 AP002512.4-202ENST00000641599 4530 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LMNB1P20700 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LMNB1P20700 RNU6-582P-201ENST00000362989 107 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 RNU6-501P-201ENST00000364072 100 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LMNB1P20700 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
LMNB1P20700 MIR23A-201ENST00000385245 73 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 GLULP6-201ENST00000399502 913 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 HSPD1P16-201ENST00000402302 394 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 MTCYBP36-201ENST00000404146 440 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.51□□□□□ -1.37
LMNB1P20700 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
LMNB1P20700 AC009480.2-201ENST00000422916 432 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 AC093698.1-201ENST00000423843 571 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC6.51□□□□□ -1.37
LMNB1P20700 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.51□□□□□ -1.37
LMNB1P20700 CYCSP11-201ENST00000436426 315 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.51□□□□□ -1.37
LMNB1P20700 RPL7P59-201ENST00000447700 943 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.51□□□□□ -1.37
LMNB1P20700 AC010307.1-201ENST00000467206 836 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 AC015724.1-201ENST00000478577 156 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 TMED11P-201ENST00000479478 690 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 AL161747.1-201ENST00000480068 358 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 AC026979.1-201ENST00000492525 396 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.51□□□□□ -1.37
LMNB1P20700 AC087276.1-201ENST00000529659 480 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 SERPINE4P-201ENST00000554978 281 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 TRAV15-201ENST00000556680 249 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 BGLT3-201ENST00000564523 994 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 PCMTD1P2-201ENST00000565017 355 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LMNB1P20700 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LMNB1P20700 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC6.51□□□□□ -1.37
LMNB1P20700 KPNA2P3-201ENST00000584190 848 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 AC091135.1-201ENST00000585943 307 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.51□□□□□ -1.37
LMNB1P20700 AL020997.2-201ENST00000602607 184 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 AL137072.1-201ENST00000603444 466 ntBASIC6.51□□□□□ -1.37
LMNB1P20700 AC017083.3-201ENST00000609955 700 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms