Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
XRCC1P18887 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
XRCC1P18887 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
XRCC1P18887 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
XRCC1P18887 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.1□□□□□ -1.75
XRCC1P18887 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.1□□□□□ -1.75
XRCC1P18887 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.1□□□□□ -1.75
XRCC1P18887 RNU6-452P-201ENST00000384406 107 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 SNORA3C-201ENST00000408792 125 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 RNA5SP317-201ENST00000410176 116 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 RNA5SP311-201ENST00000411290 116 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 RNU6-603P-201ENST00000411403 107 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 AC108032.1-201ENST00000416706 207 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 AL161631.1-201ENST00000417933 486 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 RPS24P8-201ENST00000431490 402 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 RPS6P12-201ENST00000432491 726 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.1□□□□□ -1.75
XRCC1P18887 RPL23AP46-201ENST00000438548 490 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 TPTE2P3-201ENST00000441562 1189 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.1□□□□□ -1.75
XRCC1P18887 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.1□□□□□ -1.75
XRCC1P18887 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.1□□□□□ -1.75
XRCC1P18887 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.1□□□□□ -1.75
XRCC1P18887 AC005229.2-201ENST00000456995 399 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 AL672167.3-201ENST00000465951 960 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 RPS29P19-201ENST00000479709 171 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.1□□□□□ -1.75
XRCC1P18887 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.1□□□□□ -1.75
XRCC1P18887 RNA5SP315-201ENST00000516340 116 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 RNU6-347P-201ENST00000516658 105 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 RNA5SP312-201ENST00000517068 116 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 AC105233.3-201ENST00000531125 744 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
XRCC1P18887 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.1□□□□□ -1.75
XRCC1P18887 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.1□□□□□ -1.75
XRCC1P18887 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.1□□□□□ -1.75
XRCC1P18887 AL360157.1-201ENST00000565962 87 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 MIR548Y-201ENST00000582739 110 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.1□□□□□ -1.75
XRCC1P18887 AL139286.1-201ENST00000604465 483 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 AC135178.6-201ENST00000605314 398 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.1□□□□□ -1.75
XRCC1P18887 ZYXP1-201ENST00000617638 118 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 AC090617.9-201ENST00000623751 147 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 AC024023.1-201ENST00000624530 922 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 RNA5SP196-201ENST00000625967 102 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 AL163152.1-201ENST00000642001 374 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
XRCC1P18887 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.1□□□□□ -1.75
XRCC1P18887 AC017007.4-201ENST00000503353 1352 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 AL356489.2-201ENST00000566968 3528 ntBASIC4.1□□□□□ -1.75
XRCC1P18887 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.1□□□□□ -1.75
XRCC1P18887 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
XRCC1P18887 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.1□□□□□ -1.75
XRCC1P18887 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.1□□□□□ -1.75
XRCC1P18887 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
XRCC1P18887 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
XRCC1P18887 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
XRCC1P18887 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.09□□□□□ -1.75
XRCC1P18887 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
XRCC1P18887 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
XRCC1P18887 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
XRCC1P18887 RNU6-1279P-201ENST00000383917 103 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 RNU1-13P-201ENST00000384499 162 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 SNORA37-201ENST00000384504 129 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 ENSAP1-201ENST00000392855 326 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 HMGB1P10-201ENST00000395823 563 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 MIR1179-201ENST00000408703 91 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 RN7SKP263-201ENST00000411194 309 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 AL450992.3-201ENST00000413192 568 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.09□□□□□ -1.75
XRCC1P18887 AL356095.1-201ENST00000417217 199 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.09□□□□□ -1.75
XRCC1P18887 OR4C10P-201ENST00000434991 931 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.09□□□□□ -1.75
XRCC1P18887 RPL12P46-201ENST00000436610 195 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 HSFY6P-201ENST00000445573 403 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.09□□□□□ -1.75
XRCC1P18887 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.09□□□□□ -1.75
XRCC1P18887 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.09□□□□□ -1.75
XRCC1P18887 FTH1P2-201ENST00000466086 412 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.09□□□□□ -1.75
XRCC1P18887 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.09□□□□□ -1.75
XRCC1P18887 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.09□□□□□ -1.75
XRCC1P18887 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.09□□□□□ -1.75
XRCC1P18887 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
XRCC1P18887 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.09□□□□□ -1.75
XRCC1P18887 AC004923.2-201ENST00000529649 369 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.09□□□□□ -1.75
XRCC1P18887 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.09□□□□□ -1.75
XRCC1P18887 HNRNPCP4-201ENST00000571636 900 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
XRCC1P18887 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.09□□□□□ -1.75
XRCC1P18887 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.09□□□□□ -1.75
XRCC1P18887 MIR7973-1-201ENST00000614683 76 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 AC016957.2-201ENST00000616998 848 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.09□□□□□ -1.75
XRCC1P18887 AC095038.2-201ENST00000621464 1070 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 AC103858.2-201ENST00000621471 543 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms