Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.37□□□□□ -1.39
RARAP10276 AL359955.1-201ENST00000455242 3275 ntBASIC6.37□□□□□ -1.39
RARAP10276 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
RARAP10276 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
RARAP10276 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RARAP10276 NUP58P1-201ENST00000502546 1738 ntBASIC6.36□□□□□ -1.39
RARAP10276 AC078880.4-201ENST00000617627 1749 ntBASIC6.36□□□□□ -1.39
RARAP10276 AC003973.3-201ENST00000624863 2822 ntBASIC6.36□□□□□ -1.39
RARAP10276 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
RARAP10276 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RARAP10276 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.36□□□□□ -1.39
RARAP10276 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RARAP10276 Y_RNA.46-201ENST00000362695 102 ntBASIC6.36□□□□□ -1.39
RARAP10276 Y_RNA.315-201ENST00000365117 102 ntBASIC6.36□□□□□ -1.39
RARAP10276 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RARAP10276 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.36□□□□□ -1.39
RARAP10276 RNU6-1158P-201ENST00000391167 107 ntBASIC6.36□□□□□ -1.39
RARAP10276 RPL32P23-201ENST00000397237 405 ntBASIC6.36□□□□□ -1.39
RARAP10276 RN7SKP240-201ENST00000410583 375 ntBASIC6.36□□□□□ -1.39
RARAP10276 RNU2-6P-201ENST00000411404 190 ntBASIC6.36□□□□□ -1.39
RARAP10276 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.36□□□□□ -1.39
RARAP10276 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.36□□□□□ -1.39
RARAP10276 AL121776.1-201ENST00000429337 372 ntBASIC6.36□□□□□ -1.39
RARAP10276 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.36□□□□□ -1.39
RARAP10276 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.36□□□□□ -1.39
RARAP10276 RPS3AP38-201ENST00000435889 763 ntBASIC6.36□□□□□ -1.39
RARAP10276 OR3D1P-201ENST00000438288 955 ntBASIC6.36□□□□□ -1.39
RARAP10276 AL136380.1-201ENST00000447970 162 ntBASIC6.36□□□□□ -1.39
RARAP10276 RPL23AP60-201ENST00000450011 454 ntBASIC6.36□□□□□ -1.39
RARAP10276 SBDSP1-204ENST00000453858 737 ntBASIC6.36□□□□□ -1.39
RARAP10276 AC093166.4-201ENST00000457867 318 ntBASIC6.36□□□□□ -1.39
RARAP10276 AC130509.1-201ENST00000464158 433 ntBASIC6.36□□□□□ -1.39
RARAP10276 RN7SL352P-201ENST00000466002 277 ntBASIC6.36□□□□□ -1.39
RARAP10276 SNRPCP3-201ENST00000474888 476 ntBASIC6.36□□□□□ -1.39
RARAP10276 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.36□□□□□ -1.39
RARAP10276 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.36□□□□□ -1.39
RARAP10276 RPL29P23-201ENST00000486188 442 ntBASIC6.36□□□□□ -1.39
RARAP10276 RPL12P30-201ENST00000488389 499 ntBASIC6.36□□□□□ -1.39
RARAP10276 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.36□□□□□ -1.39
RARAP10276 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.36□□□□□ -1.39
RARAP10276 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.36□□□□□ -1.39
RARAP10276 AC022616.6-201ENST00000520479 119 ntBASIC6.36□□□□□ -1.39
RARAP10276 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.36□□□□□ -1.39
RARAP10276 AL049779.3-201ENST00000557141 606 ntBASIC6.36□□□□□ -1.39
RARAP10276 AC068714.1-201ENST00000559623 800 ntBASIC6.36□□□□□ -1.39
RARAP10276 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.36□□□□□ -1.39
RARAP10276 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC6.36□□□□□ -1.39
RARAP10276 MIR5186-201ENST00000577504 120 ntBASIC6.36□□□□□ -1.39
RARAP10276 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.36□□□□□ -1.39
RARAP10276 AC124312.5-201ENST00000604451 268 ntBASIC6.36□□□□□ -1.39
RARAP10276 AC078899.5-201ENST00000612475 178 ntBASIC6.36□□□□□ -1.39
RARAP10276 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC6.36□□□□□ -1.39
RARAP10276 AC233309.1-201ENST00000619522 751 ntBASIC6.36□□□□□ -1.39
RARAP10276 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.36□□□□□ -1.39
RARAP10276 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RARAP10276 AL161912.4-201ENST00000623889 2468 ntBASIC6.36□□□□□ -1.39
RARAP10276 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RARAP10276 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RARAP10276 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
RARAP10276 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RARAP10276 AC022325.1-201ENST00000502748 2199 ntBASIC6.35□□□□□ -1.39
RARAP10276 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RARAP10276 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RARAP10276 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.35□□□□□ -1.39
RARAP10276 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
RARAP10276 AP002907.1-201ENST00000606361 1430 ntBASIC6.35□□□□□ -1.39
RARAP10276 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.35□□□□□ -1.39
RARAP10276 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RARAP10276 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.35□□□□□ -1.39
RARAP10276 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.35□□□□□ -1.39
RARAP10276 AC016583.1-201ENST00000624221 2431 ntBASIC6.35□□□□□ -1.39
RARAP10276 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.35□□□□□ -1.39
RARAP10276 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.35□□□□□ -1.39
RARAP10276 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RARAP10276 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RARAP10276 AL512646.1-201ENST00000269395 1077 ntBASIC6.35□□□□□ -1.39
RARAP10276 RN7SKP184-201ENST00000362348 333 ntBASIC6.35□□□□□ -1.39
RARAP10276 RNA5SP110-201ENST00000362638 115 ntBASIC6.35□□□□□ -1.39
RARAP10276 RNU6-223P-201ENST00000362830 107 ntBASIC6.35□□□□□ -1.39
RARAP10276 SNORD1C-201ENST00000363315 78 ntBASIC6.35□□□□□ -1.39
RARAP10276 Y_RNA.128-201ENST00000363391 112 ntBASIC6.35□□□□□ -1.39
RARAP10276 Y_RNA.184-201ENST00000363884 108 ntBASIC6.35□□□□□ -1.39
RARAP10276 SNORA4.3-201ENST00000365564 137 ntBASIC6.35□□□□□ -1.39
RARAP10276 Y_RNA.422-201ENST00000384054 114 ntBASIC6.35□□□□□ -1.39
RARAP10276 MIR188-201ENST00000385034 86 ntBASIC6.35□□□□□ -1.39
RARAP10276 MRPL42P2-201ENST00000403169 426 ntBASIC6.35□□□□□ -1.39
RARAP10276 HMGB1P17-201ENST00000403495 628 ntBASIC6.35□□□□□ -1.39
RARAP10276 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.35□□□□□ -1.39
RARAP10276 AC104837.2-201ENST00000427236 424 ntBASIC6.35□□□□□ -1.39
RARAP10276 AC073069.1-201ENST00000428657 441 ntBASIC6.35□□□□□ -1.39
RARAP10276 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RARAP10276 RPL12P16-201ENST00000431098 498 ntBASIC6.35□□□□□ -1.39
RARAP10276 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.35□□□□□ -1.39
RARAP10276 RPS3AP54-201ENST00000435535 734 ntBASIC6.35□□□□□ -1.39
RARAP10276 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.35□□□□□ -1.39
RARAP10276 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.35□□□□□ -1.39
RARAP10276 REG1CP-206ENST00000447469 496 ntBASIC6.35□□□□□ -1.39
RARAP10276 AC006480.1-201ENST00000449887 378 ntBASIC6.35□□□□□ -1.39
RARAP10276 AL162739.1-201ENST00000450606 307 ntBASIC6.35□□□□□ -1.39
RARAP10276 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms