Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.92□□□□□ -1.94
CXCL1P09341 AC091516.1-201ENST00000549191 703 ntBASIC2.92□□□□□ -1.94
CXCL1P09341 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.92□□□□□ -1.94
CXCL1P09341 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC2.92□□□□□ -1.94
CXCL1P09341 OR7E18P-201ENST00000592589 702 ntBASIC2.92□□□□□ -1.94
CXCL1P09341 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CXCL1P09341 RPL12P25-202ENST00000598100 674 ntBASIC2.92□□□□□ -1.94
CXCL1P09341 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC2.92□□□□□ -1.94
CXCL1P09341 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC2.92□□□□□ -1.94
CXCL1P09341 AC145207.9-201ENST00000623802 325 ntBASIC2.92□□□□□ -1.94
CXCL1P09341 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC2.92□□□□□ -1.94
CXCL1P09341 CDRT1-208ENST00000630868 794 ntBASIC2.92□□□□□ -1.94
CXCL1P09341 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC2.92□□□□□ -1.94
CXCL1P09341 AL139254.3-201ENST00000641097 674 ntBASIC2.92□□□□□ -1.94
CXCL1P09341 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CXCL1P09341 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.92□□□□□ -1.94
CXCL1P09341 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.92□□□□□ -1.94
CXCL1P09341 AC092326.2-201ENST00000624772 1561 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CXCL1P09341 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CXCL1P09341 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CXCL1P09341 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC2.91□□□□□ -1.94
CXCL1P09341 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
CXCL1P09341 RNA5SP31-201ENST00000411144 127 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC2.91□□□□□ -1.94
CXCL1P09341 GLRXP1-201ENST00000423261 334 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 NPM1P24-201ENST00000428039 894 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC2.91□□□□□ -1.94
CXCL1P09341 RPS29P17-201ENST00000430795 166 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 AC073264.2-201ENST00000448886 166 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 RPL7P61-201ENST00000451721 751 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 snoU13.1-201ENST00000459157 104 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 RN7SL354P-201ENST00000469282 294 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 AC084198.1-201ENST00000477747 402 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 LARP7P4-201ENST00000481075 878 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.91□□□□□ -1.94
CXCL1P09341 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC2.91□□□□□ -1.94
CXCL1P09341 AL035404.1-201ENST00000497982 568 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 AC114967.1-201ENST00000504890 259 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 AC010476.1-201ENST00000519111 851 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC2.91□□□□□ -1.94
CXCL1P09341 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.91□□□□□ -1.94
CXCL1P09341 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.91□□□□□ -1.94
CXCL1P09341 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC2.91□□□□□ -1.94
CXCL1P09341 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC2.91□□□□□ -1.94
CXCL1P09341 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CXCL1P09341 AC005255.1-201ENST00000593748 216 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 AL161912.3-201ENST00000605404 628 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 AL512624.1-201ENST00000613638 469 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 AC105105.5-201ENST00000622635 1294 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 AP003497.2-201ENST00000624220 967 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CXCL1P09341 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.91□□□□□ -1.94
CXCL1P09341 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CXCL1P09341 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CXCL1P09341 SRP72P2-201ENST00000344851 1979 ntBASIC2.91□□□□□ -1.94
CXCL1P09341 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CXCL1P09341 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.9□□□□□ -1.94
CXCL1P09341 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CXCL1P09341 AC079741.1-201ENST00000321498 212 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 SNORA51.1-201ENST00000363243 140 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 RNA5SP235-201ENST00000365411 114 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 MIR105-2-201ENST00000385083 81 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 MIR1178-201ENST00000408396 91 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC2.9□□□□□ -1.95
CXCL1P09341 NRBF2P2-201ENST00000413087 861 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 BX510359.3-201ENST00000422168 306 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 AC012498.1-201ENST00000424037 437 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 AL732292.1-201ENST00000426692 226 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 AL360081.1-201ENST00000428299 555 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 COX6B1P7-201ENST00000430845 235 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 AC074367.1-201ENST00000438685 1125 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 TXNP2-201ENST00000443918 295 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 RPS3AP46-201ENST00000448352 682 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC2.9□□□□□ -1.95
CXCL1P09341 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.9□□□□□ -1.95
CXCL1P09341 RPL23AP24-201ENST00000458203 385 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 AP000873.1-201ENST00000463987 400 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 AC092185.1-201ENST00000491371 97 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.9□□□□□ -1.95
CXCL1P09341 AC020893.1-201ENST00000502452 580 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC2.9□□□□□ -1.95
CXCL1P09341 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.9□□□□□ -1.95
CXCL1P09341 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.9□□□□□ -1.95
CXCL1P09341 AC068657.1-201ENST00000520807 306 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 AC022790.1-201ENST00000522872 204 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.9□□□□□ -1.95
CXCL1P09341 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC2.9□□□□□ -1.95
CXCL1P09341 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.9□□□□□ -1.95
CXCL1P09341 FAM25E-202ENST00000608562 189 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 AL161616.1-201ENST00000611867 286 ntBASIC2.9□□□□□ -1.95
CXCL1P09341 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CXCL1P09341 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CXCL1P09341 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CXCL1P09341 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CXCL1P09341 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
CXCL1P09341 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.9□□□□□ -1.95
CXCL1P09341 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CXCL1P09341 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms