Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC2.2□□□□□ -2.06
APOBP04114 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
APOBP04114 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.2□□□□□ -2.06
APOBP04114 AL139281.1-201ENST00000422120 335 ntBASIC2.2□□□□□ -2.06
APOBP04114 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
APOBP04114 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.2□□□□□ -2.06
APOBP04114 MAPRE1P3-201ENST00000435438 796 ntBASIC2.2□□□□□ -2.06
APOBP04114 RN7SL432P-201ENST00000484057 298 ntBASIC2.2□□□□□ -2.06
APOBP04114 AC026784.1-201ENST00000507986 352 ntBASIC2.2□□□□□ -2.06
APOBP04114 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC2.2□□□□□ -2.06
APOBP04114 AC027281.1-201ENST00000574178 758 ntBASIC2.2□□□□□ -2.06
APOBP04114 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.2□□□□□ -2.06
APOBP04114 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.2□□□□□ -2.06
APOBP04114 AC103881.1-201ENST00000603476 538 ntBASIC2.2□□□□□ -2.06
APOBP04114 AC100793.4-201ENST00000613683 429 ntBASIC2.2□□□□□ -2.06
APOBP04114 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
APOBP04114 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
APOBP04114 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
APOBP04114 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC2.19□□□□□ -2.06
APOBP04114 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC2.19□□□□□ -2.06
APOBP04114 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC2.19□□□□□ -2.06
APOBP04114 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
APOBP04114 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.19□□□□□ -2.06
APOBP04114 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
APOBP04114 TAF9BP1-201ENST00000396646 746 ntBASIC2.19□□□□□ -2.06
APOBP04114 COTL1P1-201ENST00000422309 375 ntBASIC2.19□□□□□ -2.06
APOBP04114 OR6K4P-201ENST00000423179 955 ntBASIC2.19□□□□□ -2.06
APOBP04114 RPL7P59-201ENST00000447700 943 ntBASIC2.19□□□□□ -2.06
APOBP04114 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.19□□□□□ -2.06
APOBP04114 VN1R40P-201ENST00000455196 941 ntBASIC2.19□□□□□ -2.06
APOBP04114 HIGD1AP3-201ENST00000515857 278 ntBASIC2.19□□□□□ -2.06
APOBP04114 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC2.19□□□□□ -2.06
APOBP04114 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.19□□□□□ -2.06
APOBP04114 AL162274.2-201ENST00000614406 332 ntBASIC2.19□□□□□ -2.06
APOBP04114 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 HCFC2P1-201ENST00000392864 1592 ntBASIC2.19□□□□□ -2.06
APOBP04114 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC2.19□□□□□ -2.06
APOBP04114 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
APOBP04114 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC2.19□□□□□ -2.06
APOBP04114 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
APOBP04114 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.19□□□□□ -2.06
APOBP04114 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC2.19□□□□□ -2.06
APOBP04114 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
APOBP04114 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC2.19□□□□□ -2.06
APOBP04114 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 OR56A5-201ENST00000340110 738 ntBASIC2.19□□□□□ -2.06
APOBP04114 RNA5SP229-201ENST00000410809 99 ntBASIC2.19□□□□□ -2.06
APOBP04114 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.19□□□□□ -2.06
APOBP04114 RPF2P1-201ENST00000424137 906 ntBASIC2.19□□□□□ -2.06
APOBP04114 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 AP002884.2-201ENST00000471647 395 ntBASIC2.19□□□□□ -2.06
APOBP04114 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.19□□□□□ -2.06
APOBP04114 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC2.19□□□□□ -2.06
APOBP04114 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC2.19□□□□□ -2.06
APOBP04114 AC104763.2-201ENST00000604179 382 ntBASIC2.19□□□□□ -2.06
APOBP04114 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC2.19□□□□□ -2.06
APOBP04114 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
APOBP04114 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
APOBP04114 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 AL132656.3-201ENST00000606384 1595 ntBASIC2.19□□□□□ -2.06
APOBP04114 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
APOBP04114 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.19□□□□□ -2.06
APOBP04114 AC006445.1-201ENST00000491925 405 ntBASIC2.19□□□□□ -2.06
APOBP04114 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.19□□□□□ -2.06
APOBP04114 AC023161.2-201ENST00000551218 780 ntBASIC2.19□□□□□ -2.06
APOBP04114 AC090877.1-201ENST00000561418 344 ntBASIC2.19□□□□□ -2.06
APOBP04114 AC104984.5-201ENST00000586878 94 ntBASIC2.19□□□□□ -2.06
APOBP04114 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.19□□□□□ -2.06
APOBP04114 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 AC068722.2-201ENST00000618734 544 ntBASIC2.19□□□□□ -2.06
APOBP04114 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC2.19□□□□□ -2.06
APOBP04114 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC2.19□□□□□ -2.06
APOBP04114 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC2.19□□□□□ -2.06
APOBP04114 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC2.19□□□□□ -2.06
APOBP04114 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 AL136360.1-201ENST00000503377 1900 ntBASIC2.19□□□□□ -2.06
APOBP04114 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
APOBP04114 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC2.18□□□□□ -2.06
APOBP04114 AC005002.1-201ENST00000447458 540 ntBASIC2.18□□□□□ -2.06
APOBP04114 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.18□□□□□ -2.06
APOBP04114 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
APOBP04114 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
APOBP04114 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms