Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.52□□□□□ -1.69
COL2A1P02458 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL2A1P02458 MTND4P15-201ENST00000437913 1033 ntBASIC4.52□□□□□ -1.69
COL2A1P02458 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.52□□□□□ -1.69
COL2A1P02458 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.52□□□□□ -1.69
COL2A1P02458 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.52□□□□□ -1.69
COL2A1P02458 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.52□□□□□ -1.69
COL2A1P02458 AP000926.3-201ENST00000497201 299 ntBASIC4.52□□□□□ -1.69
COL2A1P02458 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.52□□□□□ -1.69
COL2A1P02458 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.52□□□□□ -1.69
COL2A1P02458 AC119751.4-201ENST00000507498 357 ntBASIC4.52□□□□□ -1.69
COL2A1P02458 AC147055.1-201ENST00000509261 750 ntBASIC4.52□□□□□ -1.69
COL2A1P02458 RPL23AP94-201ENST00000512518 302 ntBASIC4.52□□□□□ -1.69
COL2A1P02458 OR4A12P-201ENST00000530847 918 ntBASIC4.52□□□□□ -1.69
COL2A1P02458 UBTFL9-201ENST00000534504 1148 ntBASIC4.52□□□□□ -1.69
COL2A1P02458 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.52□□□□□ -1.69
COL2A1P02458 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.52□□□□□ -1.69
COL2A1P02458 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.52□□□□□ -1.69
COL2A1P02458 GNRHR2P1-201ENST00000555315 631 ntBASIC4.52□□□□□ -1.69
COL2A1P02458 AC016839.1-201ENST00000578162 867 ntBASIC4.52□□□□□ -1.69
COL2A1P02458 VN1R87P-201ENST00000596706 487 ntBASIC4.52□□□□□ -1.69
COL2A1P02458 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.52□□□□□ -1.69
COL2A1P02458 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL2A1P02458 AL031595.2-201ENST00000624215 19071 ntBASIC4.52□□□□□ -1.69
COL2A1P02458 NAMPTP1-201ENST00000440465 2514 ntBASIC4.52□□□□□ -1.69
COL2A1P02458 OR51C1P-202ENST00000641159 1444 ntBASIC4.52□□□□□ -1.69
COL2A1P02458 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL2A1P02458 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.52□□□□□ -1.69
COL2A1P02458 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.52□□□□□ -1.69
COL2A1P02458 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL2A1P02458 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL2A1P02458 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL2A1P02458 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
COL2A1P02458 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.51□□□□□ -1.69
COL2A1P02458 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.51□□□□□ -1.69
COL2A1P02458 GCNT6-201ENST00000379591 934 ntBASIC4.51□□□□□ -1.69
COL2A1P02458 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.51□□□□□ -1.69
COL2A1P02458 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.51□□□□□ -1.69
COL2A1P02458 SSR1P2-201ENST00000415208 787 ntBASIC4.51□□□□□ -1.69
COL2A1P02458 OR4K6P-201ENST00000416478 897 ntBASIC4.51□□□□□ -1.69
COL2A1P02458 SETD6P1-201ENST00000444575 317 ntBASIC4.51□□□□□ -1.69
COL2A1P02458 RPS4XP12-201ENST00000461747 709 ntBASIC4.51□□□□□ -1.69
COL2A1P02458 RPS29P2-201ENST00000479278 136 ntBASIC4.51□□□□□ -1.69
COL2A1P02458 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.51□□□□□ -1.69
COL2A1P02458 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.51□□□□□ -1.69
COL2A1P02458 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.51□□□□□ -1.69
COL2A1P02458 AC084759.1-201ENST00000561168 290 ntBASIC4.51□□□□□ -1.69
COL2A1P02458 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
COL2A1P02458 AC020914.6-201ENST00000594327 272 ntBASIC4.51□□□□□ -1.69
COL2A1P02458 AC040174.2-201ENST00000602701 465 ntBASIC4.51□□□□□ -1.69
COL2A1P02458 GMCL1P2-201ENST00000605230 823 ntBASIC4.51□□□□□ -1.69
COL2A1P02458 U3.45-201ENST00000607547 219 ntBASIC4.51□□□□□ -1.69
COL2A1P02458 AL592494.2-201ENST00000425455 1548 ntBASIC4.51□□□□□ -1.69
COL2A1P02458 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL2A1P02458 AL136520.1-201ENST00000600311 1322 ntBASIC4.51□□□□□ -1.69
COL2A1P02458 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL2A1P02458 AC027290.2-201ENST00000623210 18662 ntBASIC4.51□□□□□ -1.69
COL2A1P02458 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL2A1P02458 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.51□□□□□ -1.69
COL2A1P02458 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
COL2A1P02458 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
COL2A1P02458 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL2A1P02458 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL2A1P02458 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.5□□□□□ -1.69
COL2A1P02458 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.5□□□□□ -1.69
COL2A1P02458 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.5□□□□□ -1.69
COL2A1P02458 EIF4EP1-201ENST00000422311 642 ntBASIC4.5□□□□□ -1.69
COL2A1P02458 AC011742.1-201ENST00000431448 434 ntBASIC4.5□□□□□ -1.69
COL2A1P02458 AC236972.1-201ENST00000433225 199 ntBASIC4.5□□□□□ -1.69
COL2A1P02458 RPS3AP46-201ENST00000448352 682 ntBASIC4.5□□□□□ -1.69
COL2A1P02458 UBDP1-202ENST00000457888 382 ntBASIC4.5□□□□□ -1.69
COL2A1P02458 AC084198.1-201ENST00000477747 402 ntBASIC4.5□□□□□ -1.69
COL2A1P02458 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.5□□□□□ -1.69
COL2A1P02458 AC005726.1-201ENST00000494679 427 ntBASIC4.5□□□□□ -1.69
COL2A1P02458 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.5□□□□□ -1.69
COL2A1P02458 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
COL2A1P02458 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.5□□□□□ -1.69
COL2A1P02458 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.5□□□□□ -1.69
COL2A1P02458 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.5□□□□□ -1.69
COL2A1P02458 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.5□□□□□ -1.69
COL2A1P02458 AC069240.1-201ENST00000548774 375 ntBASIC4.5□□□□□ -1.69
COL2A1P02458 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.5□□□□□ -1.69
COL2A1P02458 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.5□□□□□ -1.69
COL2A1P02458 AC104072.1-201ENST00000568817 668 ntBASIC4.5□□□□□ -1.69
COL2A1P02458 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.5□□□□□ -1.69
COL2A1P02458 AC245884.10-201ENST00000597355 337 ntBASIC4.5□□□□□ -1.69
COL2A1P02458 AL133247.2-201ENST00000603236 482 ntBASIC4.5□□□□□ -1.69
COL2A1P02458 AL512506.1-201ENST00000613918 449 ntBASIC4.5□□□□□ -1.69
COL2A1P02458 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.5□□□□□ -1.69
COL2A1P02458 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL2A1P02458 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL2A1P02458 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL2A1P02458 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
COL2A1P02458 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
COL2A1P02458 AC024341.1-201ENST00000526444 1552 ntBASIC4.5□□□□□ -1.69
COL2A1P02458 DDX18P6-201ENST00000450119 1997 ntBASIC4.5□□□□□ -1.69
COL2A1P02458 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL2A1P02458 RNA5SP51-201ENST00000364750 119 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
COL2A1P02458 SOD2P1-201ENST00000396543 562 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms