Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LDLRP01130 AC099654.2-201ENST00000433031 1980 ntBASIC4.46□□□□□ -1.7
LDLRP01130 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LDLRP01130 MTND5P31-201ENST00000419366 1374 ntBASIC4.46□□□□□ -1.7
LDLRP01130 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LDLRP01130 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LDLRP01130 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LDLRP01130 RNU6-317P-201ENST00000384031 107 ntBASIC4.46□□□□□ -1.7
LDLRP01130 SNORA57.1-201ENST00000391227 145 ntBASIC4.46□□□□□ -1.7
LDLRP01130 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LDLRP01130 RPL7P27-201ENST00000403775 720 ntBASIC4.46□□□□□ -1.7
LDLRP01130 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LDLRP01130 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LDLRP01130 TBCAP2-201ENST00000416175 326 ntBASIC4.46□□□□□ -1.7
LDLRP01130 AF186996.5-201ENST00000418098 904 ntBASIC4.46□□□□□ -1.7
LDLRP01130 ZNF885P-201ENST00000420174 1098 ntBASIC4.46□□□□□ -1.7
LDLRP01130 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.46□□□□□ -1.7
LDLRP01130 RPL7P57-201ENST00000423238 740 ntBASIC4.46□□□□□ -1.7
LDLRP01130 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.46□□□□□ -1.7
LDLRP01130 MTCO2P20-201ENST00000437339 673 ntBASIC4.46□□□□□ -1.7
LDLRP01130 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.46□□□□□ -1.7
LDLRP01130 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.46□□□□□ -1.7
LDLRP01130 AL009048.1-201ENST00000450437 298 ntBASIC4.46□□□□□ -1.7
LDLRP01130 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.46□□□□□ -1.7
LDLRP01130 RPL23AP12-201ENST00000467573 473 ntBASIC4.46□□□□□ -1.7
LDLRP01130 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LDLRP01130 AC012158.1-204ENST00000483430 465 ntBASIC4.46□□□□□ -1.7
LDLRP01130 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.46□□□□□ -1.7
LDLRP01130 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.46□□□□□ -1.7
LDLRP01130 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.46□□□□□ -1.7
LDLRP01130 AC008565.1-201ENST00000509046 885 ntBASIC4.46□□□□□ -1.7
LDLRP01130 AC104108.1-201ENST00000509930 412 ntBASIC4.46□□□□□ -1.7
LDLRP01130 AC005351.1-201ENST00000511152 786 ntBASIC4.46□□□□□ -1.7
LDLRP01130 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.46□□□□□ -1.7
LDLRP01130 RN7SKP265-201ENST00000516448 223 ntBASIC4.46□□□□□ -1.7
LDLRP01130 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.46□□□□□ -1.7
LDLRP01130 EEF1A1P37-201ENST00000522748 715 ntBASIC4.46□□□□□ -1.7
LDLRP01130 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.46□□□□□ -1.7
LDLRP01130 AC023538.1-201ENST00000534576 736 ntBASIC4.46□□□□□ -1.7
LDLRP01130 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.46□□□□□ -1.7
LDLRP01130 AC006518.2-201ENST00000542513 940 ntBASIC4.46□□□□□ -1.7
LDLRP01130 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.46□□□□□ -1.7
LDLRP01130 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.46□□□□□ -1.7
LDLRP01130 AC068714.1-201ENST00000559623 800 ntBASIC4.46□□□□□ -1.7
LDLRP01130 AC095057.3-201ENST00000567102 1157 ntBASIC4.46□□□□□ -1.7
LDLRP01130 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.46□□□□□ -1.7
LDLRP01130 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.46□□□□□ -1.7
LDLRP01130 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LDLRP01130 AC020910.3-201ENST00000603701 874 ntBASIC4.46□□□□□ -1.7
LDLRP01130 AC106052.1-201ENST00000608029 497 ntBASIC4.46□□□□□ -1.7
LDLRP01130 CYCSP41-201ENST00000616920 296 ntBASIC4.46□□□□□ -1.7
LDLRP01130 LINC00901.1-201ENST00000617252 152 ntBASIC4.46□□□□□ -1.7
LDLRP01130 AL023881.1-201ENST00000621088 301 ntBASIC4.46□□□□□ -1.7
LDLRP01130 AC068787.1-201ENST00000623908 691 ntBASIC4.46□□□□□ -1.7
LDLRP01130 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.46□□□□□ -1.7
LDLRP01130 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
LDLRP01130 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
LDLRP01130 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LDLRP01130 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LDLRP01130 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.46□□□□□ -1.7
LDLRP01130 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LDLRP01130 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.45□□□□□ -1.7
LDLRP01130 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LDLRP01130 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LDLRP01130 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LDLRP01130 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LDLRP01130 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LDLRP01130 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LDLRP01130 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.45□□□□□ -1.7
LDLRP01130 RNA5SP515-201ENST00000364570 118 ntBASIC4.45□□□□□ -1.7
LDLRP01130 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
LDLRP01130 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LDLRP01130 RNA5SP345-201ENST00000410646 108 ntBASIC4.45□□□□□ -1.7
LDLRP01130 ELOCP19-201ENST00000411919 318 ntBASIC4.45□□□□□ -1.7
LDLRP01130 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.45□□□□□ -1.7
LDLRP01130 AL592293.2-201ENST00000422292 996 ntBASIC4.45□□□□□ -1.7
LDLRP01130 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.45□□□□□ -1.7
LDLRP01130 RPL23AP1-201ENST00000428990 471 ntBASIC4.45□□□□□ -1.7
LDLRP01130 MTCO3P21-201ENST00000430791 643 ntBASIC4.45□□□□□ -1.7
LDLRP01130 CDY14P-201ENST00000431260 1014 ntBASIC4.45□□□□□ -1.7
LDLRP01130 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.45□□□□□ -1.7
LDLRP01130 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LDLRP01130 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.45□□□□□ -1.7
LDLRP01130 AC122718.1-201ENST00000439448 744 ntBASIC4.45□□□□□ -1.7
LDLRP01130 CDY12P-201ENST00000440679 1015 ntBASIC4.45□□□□□ -1.7
LDLRP01130 MTCO1P53-201ENST00000441633 699 ntBASIC4.45□□□□□ -1.7
LDLRP01130 MTND2P22-201ENST00000444325 1033 ntBASIC4.45□□□□□ -1.7
LDLRP01130 CDC27P1-201ENST00000445384 715 ntBASIC4.45□□□□□ -1.7
LDLRP01130 TPTE2P6-202ENST00000445572 1007 ntBASIC4.45□□□□□ -1.7
LDLRP01130 CDY13P-201ENST00000445813 1015 ntBASIC4.45□□□□□ -1.7
LDLRP01130 Z83846.1-201ENST00000446798 265 ntBASIC4.45□□□□□ -1.7
LDLRP01130 CDY23P-201ENST00000451661 1014 ntBASIC4.45□□□□□ -1.7
LDLRP01130 RPL7P32-201ENST00000457119 744 ntBASIC4.45□□□□□ -1.7
LDLRP01130 FAM133DP-201ENST00000464802 691 ntBASIC4.45□□□□□ -1.7
LDLRP01130 RPS26P28-201ENST00000470806 348 ntBASIC4.45□□□□□ -1.7
LDLRP01130 OR52A4P-201ENST00000472867 958 ntBASIC4.45□□□□□ -1.7
LDLRP01130 TRBV8-2-201ENST00000475637 270 ntBASIC4.45□□□□□ -1.7
LDLRP01130 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LDLRP01130 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.45□□□□□ -1.7
LDLRP01130 RN7SL604P-201ENST00000492589 296 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 330.8 ms