Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC104662.1-201ENST00000604448 511 ntBASIC7.36□□□□□ -1.23
RNF40O75150 AL355333.1-201ENST00000605632 279 ntBASIC7.36□□□□□ -1.23
RNF40O75150 AL121992.2-201ENST00000606262 256 ntBASIC7.36□□□□□ -1.23
RNF40O75150 AL021879.1-201ENST00000611756 288 ntBASIC7.36□□□□□ -1.23
RNF40O75150 MIR6885-201ENST00000612241 66 ntBASIC7.36□□□□□ -1.23
RNF40O75150 AC087894.3-201ENST00000623682 349 ntBASIC7.36□□□□□ -1.23
RNF40O75150 AC092608.2-201ENST00000624427 218 ntBASIC7.36□□□□□ -1.23
RNF40O75150 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF40O75150 AC233263.6-201ENST00000631132 1963 ntBASIC7.36□□□□□ -1.23
RNF40O75150 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF40O75150 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF40O75150 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF40O75150 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF40O75150 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF40O75150 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.36□□□□□ -1.23
RNF40O75150 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF40O75150 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF40O75150 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF40O75150 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
RNF40O75150 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF40O75150 AC119744.1-201ENST00000454746 1715 ntBASIC7.35□□□□□ -1.23
RNF40O75150 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF40O75150 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
RNF40O75150 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF40O75150 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
RNF40O75150 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF40O75150 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF40O75150 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF40O75150 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
RNF40O75150 RHOT1P2-201ENST00000366423 333 ntBASIC7.35□□□□□ -1.23
RNF40O75150 Y_RNA.785-201ENST00000384290 109 ntBASIC7.35□□□□□ -1.23
RNF40O75150 MIR320B1-201ENST00000390209 79 ntBASIC7.35□□□□□ -1.23
RNF40O75150 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
RNF40O75150 SNORA75.6-201ENST00000391318 127 ntBASIC7.35□□□□□ -1.23
RNF40O75150 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC7.35□□□□□ -1.23
RNF40O75150 RNU2-6P-201ENST00000411404 190 ntBASIC7.35□□□□□ -1.23
RNF40O75150 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF40O75150 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF40O75150 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF40O75150 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF40O75150 RPS29P15-201ENST00000458329 171 ntBASIC7.35□□□□□ -1.23
RNF40O75150 AL591122.1-201ENST00000487348 492 ntBASIC7.35□□□□□ -1.23
RNF40O75150 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC7.35□□□□□ -1.23
RNF40O75150 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF40O75150 GLYATL1P4-201ENST00000529326 906 ntBASIC7.35□□□□□ -1.23
RNF40O75150 MEG8-218ENST00000556720 456 ntTSL 3 BASIC7.35□□□□□ -1.23
RNF40O75150 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF40O75150 AC138761.3-201ENST00000579993 334 ntBASIC7.35□□□□□ -1.23
RNF40O75150 MIR4428-201ENST00000584884 73 ntBASIC7.35□□□□□ -1.23
RNF40O75150 AC104687.2-201ENST00000604442 342 ntBASIC7.35□□□□□ -1.23
RNF40O75150 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF40O75150 FTX_2.1-201ENST00000618816 94 ntBASIC7.35□□□□□ -1.23
RNF40O75150 AC015967.1-201ENST00000619893 476 ntBASIC7.35□□□□□ -1.23
RNF40O75150 MPP6-209ENST00000625307 126 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF40O75150 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF40O75150 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF40O75150 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF40O75150 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF40O75150 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF40O75150 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF40O75150 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF40O75150 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF40O75150 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.35□□□□□ -1.23
RNF40O75150 AC007998.4-201ENST00000612496 2533 ntBASIC7.35□□□□□ -1.23
RNF40O75150 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF40O75150 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF40O75150 AL731566.1-201ENST00000620490 1937 ntBASIC7.35□□□□□ -1.23
RNF40O75150 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF40O75150 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RNF40O75150 AL662795.2-201ENST00000624252 3706 ntBASIC7.34□□□□□ -1.23
RNF40O75150 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF40O75150 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RNF40O75150 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF40O75150 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.34□□□□□ -1.23
RNF40O75150 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF40O75150 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RNF40O75150 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RNF40O75150 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF40O75150 RNU6-200P-201ENST00000364743 107 ntBASIC7.34□□□□□ -1.23
RNF40O75150 RN7SKP55-201ENST00000364888 307 ntBASIC7.34□□□□□ -1.23
RNF40O75150 AC092634.1-201ENST00000366505 199 ntBASIC7.34□□□□□ -1.23
RNF40O75150 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RNF40O75150 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
RNF40O75150 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
RNF40O75150 Y_RNA.493-201ENST00000384422 102 ntBASIC7.34□□□□□ -1.23
RNF40O75150 MIR191-201ENST00000384873 92 ntBASIC7.34□□□□□ -1.23
RNF40O75150 AL445529.1-201ENST00000398713 389 ntBASIC7.34□□□□□ -1.23
RNF40O75150 NDUFS5P1-201ENST00000405668 289 ntBASIC7.34□□□□□ -1.23
RNF40O75150 RNU6-101P-201ENST00000410323 104 ntBASIC7.34□□□□□ -1.23
RNF40O75150 RPS21P8-201ENST00000413365 247 ntBASIC7.34□□□□□ -1.23
RNF40O75150 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF40O75150 EIF4EP1-201ENST00000422311 642 ntBASIC7.34□□□□□ -1.23
RNF40O75150 PTPN2P1-201ENST00000423212 1072 ntBASIC7.34□□□□□ -1.23
RNF40O75150 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF40O75150 PIGPP3-201ENST00000425307 415 ntBASIC7.34□□□□□ -1.23
RNF40O75150 AC137499.1-201ENST00000427602 88 ntBASIC7.34□□□□□ -1.23
RNF40O75150 FGF12-202ENST00000430714 603 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF40O75150 RPL23AP19-201ENST00000436229 369 ntBASIC7.34□□□□□ -1.23
RNF40O75150 RPEP4-201ENST00000437636 602 ntBASIC7.34□□□□□ -1.23
RNF40O75150 RPS23P9-201ENST00000448848 438 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms