Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX3O60493 AL773545.4-201ENST00000637262 310 ntBASIC4.18□□□□□ -1.74
SNX3O60493 AL513478.4-201ENST00000641636 310 ntBASIC4.18□□□□□ -1.74
SNX3O60493 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX3O60493 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SNX3O60493 ASNSP1-204ENST00000641977 1664 ntBASIC4.18□□□□□ -1.74
SNX3O60493 AL049737.1-201ENST00000413920 1403 ntBASIC4.18□□□□□ -1.74
SNX3O60493 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.18□□□□□ -1.74
SNX3O60493 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX3O60493 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SNX3O60493 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNX3O60493 AL356489.2-201ENST00000566968 3528 ntBASIC4.17□□□□□ -1.74
SNX3O60493 MARK2P15-201ENST00000432204 2186 ntBASIC4.17□□□□□ -1.74
SNX3O60493 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNX3O60493 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SNX3O60493 RPL23P2-201ENST00000320371 421 ntBASIC4.17□□□□□ -1.74
SNX3O60493 RNA5SP191-201ENST00000362585 102 ntBASIC4.17□□□□□ -1.74
SNX3O60493 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.17□□□□□ -1.74
SNX3O60493 MIR3065-201ENST00000390137 79 ntBASIC4.17□□□□□ -1.74
SNX3O60493 RNA5SP332-201ENST00000391063 115 ntBASIC4.17□□□□□ -1.74
SNX3O60493 RPL7P27-201ENST00000403775 720 ntBASIC4.17□□□□□ -1.74
SNX3O60493 AL138878.1-201ENST00000405131 347 ntBASIC4.17□□□□□ -1.74
SNX3O60493 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.17□□□□□ -1.74
SNX3O60493 SNORA11.5-201ENST00000408163 128 ntBASIC4.17□□□□□ -1.74
SNX3O60493 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.17□□□□□ -1.74
SNX3O60493 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.17□□□□□ -1.74
SNX3O60493 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.17□□□□□ -1.74
SNX3O60493 USP9YP21-201ENST00000420603 432 ntBASIC4.17□□□□□ -1.74
SNX3O60493 IFNNP1-201ENST00000429219 553 ntBASIC4.17□□□□□ -1.74
SNX3O60493 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.17□□□□□ -1.74
SNX3O60493 RPS20P1-201ENST00000434853 354 ntBASIC4.17□□□□□ -1.74
SNX3O60493 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.17□□□□□ -1.74
SNX3O60493 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.17□□□□□ -1.74
SNX3O60493 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.17□□□□□ -1.74
SNX3O60493 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.17□□□□□ -1.74
SNX3O60493 AL592437.1-201ENST00000443781 492 ntBASIC4.17□□□□□ -1.74
SNX3O60493 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.17□□□□□ -1.74
SNX3O60493 RPL7P32-201ENST00000457119 744 ntBASIC4.17□□□□□ -1.74
SNX3O60493 RN7SL93P-201ENST00000463035 293 ntBASIC4.17□□□□□ -1.74
SNX3O60493 OR52A4P-201ENST00000472867 958 ntBASIC4.17□□□□□ -1.74
SNX3O60493 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.17□□□□□ -1.74
SNX3O60493 AC119751.1-201ENST00000513357 765 ntBASIC4.17□□□□□ -1.74
SNX3O60493 RNU6-276P-201ENST00000516114 96 ntBASIC4.17□□□□□ -1.74
SNX3O60493 IGKV2-18-201ENST00000522607 343 ntBASIC4.17□□□□□ -1.74
SNX3O60493 OR8I1P-201ENST00000529291 931 ntBASIC4.17□□□□□ -1.74
SNX3O60493 AC008033.2-201ENST00000542626 177 ntBASIC4.17□□□□□ -1.74
SNX3O60493 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.17□□□□□ -1.74
SNX3O60493 AL442163.2-201ENST00000553912 710 ntBASIC4.17□□□□□ -1.74
SNX3O60493 OR4U1P-201ENST00000554958 912 ntBASIC4.17□□□□□ -1.74
SNX3O60493 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.17□□□□□ -1.74
SNX3O60493 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.17□□□□□ -1.74
SNX3O60493 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.17□□□□□ -1.74
SNX3O60493 AC245884.10-201ENST00000597355 337 ntBASIC4.17□□□□□ -1.74
SNX3O60493 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.17□□□□□ -1.74
SNX3O60493 AC079587.1-201ENST00000603846 277 ntBASIC4.17□□□□□ -1.74
SNX3O60493 AC105148.1-201ENST00000604961 409 ntBASIC4.17□□□□□ -1.74
SNX3O60493 AC090948.2-201ENST00000607363 564 ntBASIC4.17□□□□□ -1.74
SNX3O60493 AL021997.2-201ENST00000615674 271 ntBASIC4.17□□□□□ -1.74
SNX3O60493 AC022960.3-201ENST00000619794 441 ntBASIC4.17□□□□□ -1.74
SNX3O60493 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.17□□□□□ -1.74
SNX3O60493 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
SNX3O60493 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.17□□□□□ -1.74
SNX3O60493 AL049767.1-202ENST00000637826 242 ntBASIC4.17□□□□□ -1.74
SNX3O60493 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNX3O60493 CYP1D1P-201ENST00000416662 1433 ntBASIC4.17□□□□□ -1.74
SNX3O60493 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SNX3O60493 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.17□□□□□ -1.74
SNX3O60493 AC046144.1-201ENST00000478559 1853 ntBASIC4.17□□□□□ -1.74
SNX3O60493 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SNX3O60493 AL118496.1-201ENST00000440201 1812 ntBASIC4.16□□□□□ -1.74
SNX3O60493 NCAPGP1-201ENST00000505112 1814 ntBASIC4.16□□□□□ -1.74
SNX3O60493 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SNX3O60493 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
SNX3O60493 RNU5E-10P-201ENST00000363506 118 ntBASIC4.16□□□□□ -1.74
SNX3O60493 U3.25-201ENST00000391209 220 ntBASIC4.16□□□□□ -1.74
SNX3O60493 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.16□□□□□ -1.74
SNX3O60493 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SNX3O60493 BX510359.2-201ENST00000417920 305 ntBASIC4.16□□□□□ -1.74
SNX3O60493 AL139095.3-201ENST00000419672 1203 ntBASIC4.16□□□□□ -1.74
SNX3O60493 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.16□□□□□ -1.74
SNX3O60493 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SNX3O60493 AC004074.1-201ENST00000421810 1063 ntBASIC4.16□□□□□ -1.74
SNX3O60493 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX3O60493 EIF1P3-201ENST00000423841 334 ntBASIC4.16□□□□□ -1.74
SNX3O60493 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX3O60493 AC092634.2-201ENST00000428146 1010 ntBASIC4.16□□□□□ -1.74
SNX3O60493 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.16□□□□□ -1.74
SNX3O60493 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX3O60493 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.16□□□□□ -1.74
SNX3O60493 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SNX3O60493 CNOT7P2-201ENST00000441051 832 ntBASIC4.16□□□□□ -1.74
SNX3O60493 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SNX3O60493 AC092647.3-201ENST00000443044 633 ntBASIC4.16□□□□□ -1.74
SNX3O60493 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SNX3O60493 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX3O60493 AURKAPS1-201ENST00000451805 1212 ntBASIC4.16□□□□□ -1.74
SNX3O60493 AC244505.3-201ENST00000454598 187 ntBASIC4.16□□□□□ -1.74
SNX3O60493 snoU109.3-201ENST00000459477 145 ntBASIC4.16□□□□□ -1.74
SNX3O60493 AC104164.3-201ENST00000467363 1258 ntBASIC4.16□□□□□ -1.74
SNX3O60493 PRDX3P4-201ENST00000470828 747 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms