Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.93□□□□□ -1.94
SSSCA1O60232 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.93□□□□□ -1.94
SSSCA1O60232 RNU4-39P-201ENST00000362455 127 ntBASIC2.93□□□□□ -1.94
SSSCA1O60232 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.93□□□□□ -1.94
SSSCA1O60232 U3.22-201ENST00000391120 215 ntBASIC2.93□□□□□ -1.94
SSSCA1O60232 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC2.93□□□□□ -1.94
SSSCA1O60232 ZNF602P-201ENST00000405929 924 ntBASIC2.93□□□□□ -1.94
SSSCA1O60232 MTHFD2P2-201ENST00000407725 247 ntBASIC2.93□□□□□ -1.94
SSSCA1O60232 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.93□□□□□ -1.94
SSSCA1O60232 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC2.93□□□□□ -1.94
SSSCA1O60232 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.93□□□□□ -1.94
SSSCA1O60232 AL390879.2-203ENST00000426943 1121 ntBASIC2.93□□□□□ -1.94
SSSCA1O60232 AL772161.1-201ENST00000439130 476 ntBASIC2.93□□□□□ -1.94
SSSCA1O60232 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SSSCA1O60232 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC2.93□□□□□ -1.94
SSSCA1O60232 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SSSCA1O60232 HMGN2P7-201ENST00000456186 273 ntBASIC2.93□□□□□ -1.94
SSSCA1O60232 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SSSCA1O60232 OR9M1P-201ENST00000459641 921 ntBASIC2.93□□□□□ -1.94
SSSCA1O60232 AC087312.1-201ENST00000471411 480 ntBASIC2.93□□□□□ -1.94
SSSCA1O60232 RPL32P9-201ENST00000487963 407 ntBASIC2.93□□□□□ -1.94
SSSCA1O60232 RPL7P47-201ENST00000497299 556 ntBASIC2.93□□□□□ -1.94
SSSCA1O60232 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC2.93□□□□□ -1.94
SSSCA1O60232 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.93□□□□□ -1.94
SSSCA1O60232 FABP5P12-201ENST00000515543 389 ntBASIC2.93□□□□□ -1.94
SSSCA1O60232 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.93□□□□□ -1.94
SSSCA1O60232 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.93□□□□□ -1.94
SSSCA1O60232 AC010547.7-201ENST00000570323 333 ntBASIC2.93□□□□□ -1.94
SSSCA1O60232 AC120057.2-201ENST00000571520 271 ntBASIC2.93□□□□□ -1.94
SSSCA1O60232 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC2.93□□□□□ -1.94
SSSCA1O60232 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC2.93□□□□□ -1.94
SSSCA1O60232 AL732618.1-201ENST00000623251 301 ntBASIC2.93□□□□□ -1.94
SSSCA1O60232 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SSSCA1O60232 AL513302.2-201ENST00000562313 1842 ntBASIC2.93□□□□□ -1.94
SSSCA1O60232 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
SSSCA1O60232 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SSSCA1O60232 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.92□□□□□ -1.94
SSSCA1O60232 PHKBP1-201ENST00000450951 1951 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 BRAFP1-201ENST00000445336 2703 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SSSCA1O60232 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SSSCA1O60232 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC2.92□□□□□ -1.94
SSSCA1O60232 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SSSCA1O60232 RNU1-75P-201ENST00000347264 129 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
SSSCA1O60232 MT-RNR1-201ENST00000389680 954 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 HMGB3P18-201ENST00000406327 590 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC2.92□□□□□ -1.94
SSSCA1O60232 MTND4P22-201ENST00000413116 1169 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 AC068533.1-201ENST00000418542 415 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 RPS12P23-201ENST00000419579 400 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 PTP4A1P5-201ENST00000420305 455 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 AL513174.1-201ENST00000423182 629 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 GLRXP1-201ENST00000423261 334 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 AC023141.6-201ENST00000429418 337 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 AC245517.2-201ENST00000442890 346 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.92□□□□□ -1.94
SSSCA1O60232 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC2.92□□□□□ -1.94
SSSCA1O60232 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC2.92□□□□□ -1.94
SSSCA1O60232 RNU7-170P-201ENST00000459303 61 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 RPL23AP62-201ENST00000463396 453 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC2.92□□□□□ -1.94
SSSCA1O60232 RN7SL442P-201ENST00000473804 320 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 RNU2-27P-201ENST00000516185 142 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SSSCA1O60232 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.92□□□□□ -1.94
SSSCA1O60232 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.92□□□□□ -1.94
SSSCA1O60232 AP003730.1-201ENST00000524605 285 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 AP001636.2-201ENST00000525517 696 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 AP000926.4-201ENST00000527351 454 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC2.92□□□□□ -1.94
SSSCA1O60232 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.92□□□□□ -1.94
SSSCA1O60232 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.92□□□□□ -1.94
SSSCA1O60232 AC084757.1-201ENST00000559987 490 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC2.92□□□□□ -1.94
SSSCA1O60232 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.92□□□□□ -1.94
SSSCA1O60232 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.92□□□□□ -1.94
SSSCA1O60232 AC011492.1-201ENST00000600023 315 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 AC006077.1-201ENST00000604746 343 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.92□□□□□ -1.94
SSSCA1O60232 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.92□□□□□ -1.94
SSSCA1O60232 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SSSCA1O60232 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.92□□□□□ -1.94
SSSCA1O60232 AL136964.1-201ENST00000622038 2990 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SSSCA1O60232 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SSSCA1O60232 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.92□□□□□ -1.94
SSSCA1O60232 ASNSP1-204ENST00000641977 1664 ntBASIC2.92□□□□□ -1.94
SSSCA1O60232 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
SSSCA1O60232 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.91□□□□□ -1.94
SSSCA1O60232 OTUD4P1-201ENST00000237841 3067 ntBASIC2.91□□□□□ -1.94
SSSCA1O60232 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SSSCA1O60232 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SSSCA1O60232 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SSSCA1O60232 SOD2P1-201ENST00000396543 562 ntBASIC2.91□□□□□ -1.94
SSSCA1O60232 OR8G2P-201ENST00000412796 908 ntBASIC2.91□□□□□ -1.94
SSSCA1O60232 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC2.91□□□□□ -1.94
SSSCA1O60232 COX6CP17-201ENST00000421389 185 ntBASIC2.91□□□□□ -1.94
SSSCA1O60232 ARF4P2-201ENST00000430209 526 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms