Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
LDB2O43679 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.59□□□□□ -1.67
LDB2O43679 AC108043.1-201ENST00000512696 574 ntBASIC4.59□□□□□ -1.67
LDB2O43679 RAB9BP1-201ENST00000519581 626 ntBASIC4.59□□□□□ -1.67
LDB2O43679 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.59□□□□□ -1.67
LDB2O43679 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.59□□□□□ -1.67
LDB2O43679 AP000926.4-201ENST00000527351 454 ntBASIC4.59□□□□□ -1.67
LDB2O43679 AP002812.4-201ENST00000532139 286 ntBASIC4.59□□□□□ -1.67
LDB2O43679 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LDB2O43679 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.59□□□□□ -1.67
LDB2O43679 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.59□□□□□ -1.67
LDB2O43679 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.59□□□□□ -1.67
LDB2O43679 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.59□□□□□ -1.67
LDB2O43679 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.59□□□□□ -1.67
LDB2O43679 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.59□□□□□ -1.67
LDB2O43679 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.59□□□□□ -1.67
LDB2O43679 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.59□□□□□ -1.67
LDB2O43679 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.59□□□□□ -1.67
LDB2O43679 DPRXP5-201ENST00000604662 539 ntBASIC4.59□□□□□ -1.67
LDB2O43679 BNIP3P4-201ENST00000604946 565 ntBASIC4.59□□□□□ -1.67
LDB2O43679 AL392112.1-201ENST00000605115 829 ntBASIC4.59□□□□□ -1.67
LDB2O43679 AC090525.3-201ENST00000605601 189 ntBASIC4.59□□□□□ -1.67
LDB2O43679 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.59□□□□□ -1.67
LDB2O43679 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
LDB2O43679 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LDB2O43679 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
LDB2O43679 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
LDB2O43679 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LDB2O43679 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LDB2O43679 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LDB2O43679 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.58□□□□□ -1.68
LDB2O43679 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LDB2O43679 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LDB2O43679 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.58□□□□□ -1.68
LDB2O43679 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LDB2O43679 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.58□□□□□ -1.68
LDB2O43679 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LDB2O43679 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.58□□□□□ -1.68
LDB2O43679 FAM133CP-201ENST00000332869 704 ntBASIC4.58□□□□□ -1.68
LDB2O43679 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LDB2O43679 RNU6-1339P-201ENST00000363574 91 ntBASIC4.58□□□□□ -1.68
LDB2O43679 RN7SKP106-201ENST00000410832 272 ntBASIC4.58□□□□□ -1.68
LDB2O43679 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.58□□□□□ -1.68
LDB2O43679 AC069213.2-201ENST00000420238 366 ntBASIC4.58□□□□□ -1.68
LDB2O43679 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LDB2O43679 OR5AW1P-201ENST00000426334 1006 ntBASIC4.58□□□□□ -1.68
LDB2O43679 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LDB2O43679 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LDB2O43679 AC234064.1-201ENST00000436312 247 ntBASIC4.58□□□□□ -1.68
LDB2O43679 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.58□□□□□ -1.68
LDB2O43679 AC009263.1-201ENST00000441193 1239 ntBASIC4.58□□□□□ -1.68
LDB2O43679 KATNBL1P3-201ENST00000443475 909 ntBASIC4.58□□□□□ -1.68
LDB2O43679 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.58□□□□□ -1.68
LDB2O43679 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.58□□□□□ -1.68
LDB2O43679 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.58□□□□□ -1.68
LDB2O43679 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.58□□□□□ -1.68
LDB2O43679 AL133244.1-201ENST00000456007 258 ntBASIC4.58□□□□□ -1.68
LDB2O43679 AC010326.1-201ENST00000462726 602 ntBASIC4.58□□□□□ -1.68
LDB2O43679 RN7SL860P-201ENST00000473738 223 ntBASIC4.58□□□□□ -1.68
LDB2O43679 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.58□□□□□ -1.68
LDB2O43679 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.58□□□□□ -1.68
LDB2O43679 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.58□□□□□ -1.68
LDB2O43679 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.58□□□□□ -1.68
LDB2O43679 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LDB2O43679 POLR2KP1-201ENST00000553226 168 ntBASIC4.58□□□□□ -1.68
LDB2O43679 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.58□□□□□ -1.68
LDB2O43679 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.58□□□□□ -1.68
LDB2O43679 MIR5708-201ENST00000579723 85 ntBASIC4.58□□□□□ -1.68
LDB2O43679 EIF1P6-201ENST00000600054 334 ntBASIC4.58□□□□□ -1.68
LDB2O43679 AC234771.5-201ENST00000600161 514 ntBASIC4.58□□□□□ -1.68
LDB2O43679 MRPS35P3-201ENST00000603189 709 ntBASIC4.58□□□□□ -1.68
LDB2O43679 AC008745.1-201ENST00000604064 271 ntBASIC4.58□□□□□ -1.68
LDB2O43679 AL133507.1-201ENST00000605269 557 ntBASIC4.58□□□□□ -1.68
LDB2O43679 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.58□□□□□ -1.68
LDB2O43679 AL360219.1-201ENST00000610230 366 ntBASIC4.58□□□□□ -1.68
LDB2O43679 AP000255.1-201ENST00000610276 676 ntBASIC4.58□□□□□ -1.68
LDB2O43679 MIR6780A-201ENST00000615089 68 ntBASIC4.58□□□□□ -1.68
LDB2O43679 MIR3974-201ENST00000637126 96 ntBASIC4.58□□□□□ -1.68
LDB2O43679 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.58□□□□□ -1.68
LDB2O43679 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LDB2O43679 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
LDB2O43679 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LDB2O43679 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LDB2O43679 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LDB2O43679 BX005019.1-201ENST00000561881 1810 ntBASIC4.58□□□□□ -1.68
LDB2O43679 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
LDB2O43679 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LDB2O43679 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LDB2O43679 OR14L1P-202ENST00000641545 3009 ntBASIC4.57□□□□□ -1.68
LDB2O43679 AC010300.1-201ENST00000600671 5134 ntBASIC4.57□□□□□ -1.68
LDB2O43679 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LDB2O43679 AC079741.1-201ENST00000321498 212 ntBASIC4.57□□□□□ -1.68
LDB2O43679 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LDB2O43679 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.57□□□□□ -1.68
LDB2O43679 RNA5SP397-201ENST00000391323 118 ntBASIC4.57□□□□□ -1.68
LDB2O43679 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LDB2O43679 AL356131.1-201ENST00000405826 414 ntBASIC4.57□□□□□ -1.68
LDB2O43679 AC009518.2-201ENST00000418056 731 ntBASIC4.57□□□□□ -1.68
LDB2O43679 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.57□□□□□ -1.68
LDB2O43679 RAD23BP1-201ENST00000421404 1227 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms