Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
PRPF3O43395 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PRPF3O43395 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PRPF3O43395 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.5□□□□□ -1.53
PRPF3O43395 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PRPF3O43395 AL442639.1-201ENST00000625030 1899 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 RNU6-492P-201ENST00000363035 104 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 SNORD113-6-201ENST00000363345 75 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PRPF3O43395 RNA5SP87-201ENST00000384155 118 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 RNU6-83P-201ENST00000384568 112 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PRPF3O43395 AL359643.1-201ENST00000404109 423 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PRPF3O43395 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.5□□□□□ -1.53
PRPF3O43395 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.5□□□□□ -1.53
PRPF3O43395 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.5□□□□□ -1.53
PRPF3O43395 AL513175.1-201ENST00000431492 780 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 RPS27P18-201ENST00000431701 247 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.5□□□□□ -1.53
PRPF3O43395 NMNAT1P2-201ENST00000435192 860 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 AC093155.1-201ENST00000440164 826 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.5□□□□□ -1.53
PRPF3O43395 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.5□□□□□ -1.53
PRPF3O43395 RPL21P134-201ENST00000453468 483 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 AC091685.2-201ENST00000454924 864 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 NF1P3-201ENST00000457709 450 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 AC092324.1-201ENST00000468671 324 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.5□□□□□ -1.53
PRPF3O43395 RPL5P22-201ENST00000480199 884 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 AC025674.1-201ENST00000507074 324 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 AC079395.1-201ENST00000510981 262 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 AC109471.1-201ENST00000511631 612 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 SNORD116-26-201ENST00000516006 96 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 RN7SKP276-201ENST00000516242 268 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 AC027309.2-201ENST00000520566 192 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.5□□□□□ -1.53
PRPF3O43395 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.5□□□□□ -1.53
PRPF3O43395 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.5□□□□□ -1.53
PRPF3O43395 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.5□□□□□ -1.53
PRPF3O43395 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.5□□□□□ -1.53
PRPF3O43395 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.5□□□□□ -1.53
PRPF3O43395 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.5□□□□□ -1.53
PRPF3O43395 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.5□□□□□ -1.53
PRPF3O43395 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.5□□□□□ -1.53
PRPF3O43395 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.5□□□□□ -1.53
PRPF3O43395 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.5□□□□□ -1.53
PRPF3O43395 DUXAP3-201ENST00000603616 594 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.5□□□□□ -1.53
PRPF3O43395 MKKS-204ENST00000639674 192 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.5□□□□□ -1.53
PRPF3O43395 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.5□□□□□ -1.53
PRPF3O43395 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PRPF3O43395 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PRPF3O43395 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PRPF3O43395 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PRPF3O43395 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 AL359922.3-201ENST00000624779 1670 ntBASIC5.5□□□□□ -1.53
PRPF3O43395 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PRPF3O43395 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PRPF3O43395 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PRPF3O43395 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
PRPF3O43395 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
PRPF3O43395 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PRPF3O43395 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PRPF3O43395 RNU6-1214P-201ENST00000363650 109 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.49□□□□□ -1.53
PRPF3O43395 MIR506-201ENST00000384998 124 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PRPF3O43395 RNU1-82P-201ENST00000390851 165 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 MTCO3P31-201ENST00000405526 789 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.49□□□□□ -1.53
PRPF3O43395 AC006960.1-201ENST00000419980 153 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 SKP1P3-201ENST00000429280 487 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.49□□□□□ -1.53
PRPF3O43395 CEACAMP1-201ENST00000434624 1035 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.49□□□□□ -1.53
PRPF3O43395 AC005154.2-201ENST00000438110 379 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 AC108463.1-201ENST00000450258 347 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 NDUFA5P7-201ENST00000452914 242 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 RPS15AP1-201ENST00000457423 391 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 CCDC75P1-201ENST00000469247 791 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.49□□□□□ -1.53
PRPF3O43395 RN7SL346P-201ENST00000491561 294 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.49□□□□□ -1.53
PRPF3O43395 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.49□□□□□ -1.53
PRPF3O43395 RNU6-885P-201ENST00000516607 104 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.49□□□□□ -1.53
PRPF3O43395 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.49□□□□□ -1.53
PRPF3O43395 OR5M2P-201ENST00000529003 936 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.49□□□□□ -1.53
PRPF3O43395 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.49□□□□□ -1.53
PRPF3O43395 AC009712.1-201ENST00000564938 316 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 UBE2FP2-201ENST00000566646 462 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.49□□□□□ -1.53
PRPF3O43395 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.49□□□□□ -1.53
PRPF3O43395 AC008687.2-201ENST00000597865 520 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 VN1R82P-201ENST00000601481 356 ntBASIC5.49□□□□□ -1.53
PRPF3O43395 AL512782.1-201ENST00000603093 364 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms