Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC006363.1-201ENST00000603806 463 ntBASIC6.47□□□□□ -1.37
CUX2O14529 AC007998.5-201ENST00000622938 237 ntBASIC6.47□□□□□ -1.37
CUX2O14529 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
CUX2O14529 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC6.46□□□□□ -1.37
CUX2O14529 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC6.46□□□□□ -1.38
CUX2O14529 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CUX2O14529 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CUX2O14529 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CUX2O14529 VN1R8P-201ENST00000407739 893 ntBASIC6.46□□□□□ -1.38
CUX2O14529 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CUX2O14529 AC073335.1-201ENST00000427776 363 ntBASIC6.46□□□□□ -1.38
CUX2O14529 RPL12P18-201ENST00000437175 325 ntBASIC6.46□□□□□ -1.38
CUX2O14529 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.46□□□□□ -1.38
CUX2O14529 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.46□□□□□ -1.38
CUX2O14529 AC124312.4-201ENST00000605533 310 ntBASIC6.46□□□□□ -1.38
CUX2O14529 OR7M1P-201ENST00000608946 533 ntBASIC6.46□□□□□ -1.38
CUX2O14529 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC6.46□□□□□ -1.38
CUX2O14529 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC6.45□□□□□ -1.38
CUX2O14529 AC007823.1-201ENST00000569932 1566 ntBASIC6.45□□□□□ -1.38
CUX2O14529 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CUX2O14529 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CUX2O14529 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC6.45□□□□□ -1.38
CUX2O14529 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CUX2O14529 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CUX2O14529 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CUX2O14529 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC6.45□□□□□ -1.38
CUX2O14529 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.45□□□□□ -1.38
CUX2O14529 MIR5680-201ENST00000577577 84 ntBASIC6.45□□□□□ -1.38
CUX2O14529 AL606834.2-201ENST00000602954 668 ntBASIC6.45□□□□□ -1.38
CUX2O14529 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC6.45□□□□□ -1.38
CUX2O14529 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CUX2O14529 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CUX2O14529 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CUX2O14529 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC6.44□□□□□ -1.38
CUX2O14529 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CUX2O14529 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
CUX2O14529 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CUX2O14529 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CUX2O14529 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC6.44□□□□□ -1.38
CUX2O14529 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC6.44□□□□□ -1.38
CUX2O14529 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.44□□□□□ -1.38
CUX2O14529 GEMIN8P3-201ENST00000445417 720 ntBASIC6.44□□□□□ -1.38
CUX2O14529 AC015922.4-201ENST00000612568 690 ntBASIC6.44□□□□□ -1.38
CUX2O14529 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.44□□□□□ -1.38
CUX2O14529 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CUX2O14529 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CUX2O14529 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CUX2O14529 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CUX2O14529 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CUX2O14529 RNU6-673P-201ENST00000365084 104 ntBASIC6.43□□□□□ -1.38
CUX2O14529 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.43□□□□□ -1.38
CUX2O14529 AC010740.1-201ENST00000417035 684 ntBASIC6.43□□□□□ -1.38
CUX2O14529 HSPE1P16-201ENST00000426640 348 ntBASIC6.43□□□□□ -1.38
CUX2O14529 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC6.43□□□□□ -1.38
CUX2O14529 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC6.43□□□□□ -1.38
CUX2O14529 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.43□□□□□ -1.38
CUX2O14529 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CUX2O14529 AC135001.1-201ENST00000544546 283 ntBASIC6.43□□□□□ -1.38
CUX2O14529 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.43□□□□□ -1.38
CUX2O14529 AC133552.5-201ENST00000604266 540 ntBASIC6.43□□□□□ -1.38
CUX2O14529 AC093732.2-201ENST00000607950 274 ntBASIC6.43□□□□□ -1.38
CUX2O14529 AL353600.1-201ENST00000608148 251 ntBASIC6.43□□□□□ -1.38
CUX2O14529 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.43□□□□□ -1.38
CUX2O14529 AC124312.6-202ENST00000623624 418 ntBASIC6.43□□□□□ -1.38
CUX2O14529 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CUX2O14529 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CUX2O14529 Z95327.2-201ENST00000414579 1873 ntBASIC6.43□□□□□ -1.38
CUX2O14529 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CUX2O14529 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CUX2O14529 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
CUX2O14529 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CUX2O14529 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CUX2O14529 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CUX2O14529 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC6.42□□□□□ -1.38
CUX2O14529 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CUX2O14529 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CUX2O14529 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC6.42□□□□□ -1.38
CUX2O14529 RNU6-233P-201ENST00000410845 141 ntBASIC6.42□□□□□ -1.38
CUX2O14529 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.42□□□□□ -1.38
CUX2O14529 AL158071.1-201ENST00000430315 461 ntBASIC6.42□□□□□ -1.38
CUX2O14529 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CUX2O14529 YWHAEP4-201ENST00000505390 198 ntBASIC6.42□□□□□ -1.38
CUX2O14529 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC6.42□□□□□ -1.38
CUX2O14529 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC6.42□□□□□ -1.38
CUX2O14529 AC092747.2-201ENST00000545069 983 ntBASIC6.42□□□□□ -1.38
CUX2O14529 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC6.42□□□□□ -1.38
CUX2O14529 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.42□□□□□ -1.38
CUX2O14529 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC6.42□□□□□ -1.38
CUX2O14529 CR383656.14-201ENST00000551951 406 ntBASIC6.42□□□□□ -1.38
CUX2O14529 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.42□□□□□ -1.38
CUX2O14529 AC079684.1-201ENST00000621405 437 ntBASIC6.42□□□□□ -1.38
CUX2O14529 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.42□□□□□ -1.38
CUX2O14529 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC6.42□□□□□ -1.38
CUX2O14529 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CUX2O14529 SNORA54-201ENST00000384281 123 ntBASIC6.41□□□□□ -1.38
CUX2O14529 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.41□□□□□ -1.38
CUX2O14529 AL139413.1-201ENST00000421309 217 ntBASIC6.41□□□□□ -1.38
CUX2O14529 MAPRE1P3-201ENST00000435438 796 ntBASIC6.41□□□□□ -1.38
CUX2O14529 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC6.41□□□□□ -1.38
CUX2O14529 PSMC1P13-201ENST00000458195 985 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 198.5 ms