Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
FOXN3O00409 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXN3O00409 FAM3C2-201ENST00000312214 681 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.17□□□□□ -1.58
FOXN3O00409 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
FOXN3O00409 Y_RNA.408-201ENST00000383987 102 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 SNORD116-2-201ENST00000384274 95 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 SNORD116-6-201ENST00000384711 96 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.17□□□□□ -1.58
FOXN3O00409 AL592291.1-201ENST00000403830 352 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 RNU6-757P-201ENST00000410334 100 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 RNU4-34P-201ENST00000410431 124 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.17□□□□□ -1.58
FOXN3O00409 AL358176.3-201ENST00000420757 454 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 RPL7P44-201ENST00000424827 742 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 SKP1P3-201ENST00000429280 487 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.17□□□□□ -1.58
FOXN3O00409 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.17□□□□□ -1.58
FOXN3O00409 RPS17P8-201ENST00000434525 335 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.17□□□□□ -1.58
FOXN3O00409 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.17□□□□□ -1.58
FOXN3O00409 MYO5BP2-201ENST00000449815 1277 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.17□□□□□ -1.58
FOXN3O00409 ATG12P2-201ENST00000456830 416 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.17□□□□□ -1.58
FOXN3O00409 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.17□□□□□ -1.58
FOXN3O00409 snoU13.20-201ENST00000459180 104 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 MTND1P16-201ENST00000465177 898 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
FOXN3O00409 AP000563.1-201ENST00000490865 758 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 RN7SL808P-201ENST00000496066 299 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.17□□□□□ -1.58
FOXN3O00409 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.17□□□□□ -1.58
FOXN3O00409 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.17□□□□□ -1.58
FOXN3O00409 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.17□□□□□ -1.58
FOXN3O00409 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.17□□□□□ -1.58
FOXN3O00409 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.17□□□□□ -1.58
FOXN3O00409 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.17□□□□□ -1.58
FOXN3O00409 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.17□□□□□ -1.58
FOXN3O00409 EIF5A2P1-201ENST00000564027 460 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 AC079171.1-201ENST00000568788 914 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.17□□□□□ -1.58
FOXN3O00409 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.17□□□□□ -1.58
FOXN3O00409 AL390838.2-201ENST00000602394 274 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 AC013444.2-201ENST00000603317 787 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 AC087763.1-201ENST00000603391 286 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.17□□□□□ -1.58
FOXN3O00409 AC078883.4-201ENST00000623218 367 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXN3O00409 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
FOXN3O00409 TLK1P1-201ENST00000456760 2440 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXN3O00409 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXN3O00409 ZNF652P1-201ENST00000442420 1309 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
FOXN3O00409 AL731566.1-201ENST00000620490 1937 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.17□□□□□ -1.58
FOXN3O00409 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXN3O00409 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXN3O00409 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXN3O00409 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXN3O00409 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXN3O00409 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXN3O00409 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXN3O00409 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXN3O00409 RN7SKP104-201ENST00000362605 328 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 RNU6-115P-201ENST00000364310 107 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
FOXN3O00409 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
FOXN3O00409 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXN3O00409 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXN3O00409 ARL4AP5-201ENST00000404372 599 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXN3O00409 RN7SKP213-201ENST00000410746 298 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 RPL23AP27-201ENST00000415161 451 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXN3O00409 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXN3O00409 PTP4A1P5-201ENST00000420305 455 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 RPP40P1-201ENST00000426762 456 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 RBMY2QP-201ENST00000429799 1147 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.16□□□□□ -1.58
FOXN3O00409 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
FOXN3O00409 AC112498.1-201ENST00000444401 332 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 SETD6P1-201ENST00000444575 317 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 AL034418.1-201ENST00000448675 860 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXN3O00409 RPL12P26-201ENST00000452430 487 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 AC234781.3-201ENST00000452540 973 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 AL645937.3-201ENST00000453647 936 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
FOXN3O00409 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXN3O00409 RN7SL177P-201ENST00000476596 299 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXN3O00409 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXN3O00409 MTCYBP16-201ENST00000509187 1129 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 MTCO3P28-201ENST00000513351 515 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 RNU6-488P-201ENST00000515918 99 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXN3O00409 AC090819.1-201ENST00000523800 1111 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 OR5M2P-201ENST00000529003 936 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms