Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RNA5SP73-201ENST00000516744 108 ntBASIC4.53□□□□□ -1.68
O00370 AP003102.1-201ENST00000525638 661 ntBASIC4.53□□□□□ -1.68
O00370 C1DP5-201ENST00000525775 383 ntBASIC4.53□□□□□ -1.68
O00370 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.53□□□□□ -1.68
O00370 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
O00370 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.53□□□□□ -1.68
O00370 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.53□□□□□ -1.68
O00370 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.53□□□□□ -1.68
O00370 FAM27D1-201ENST00000612308 341 ntBASIC4.53□□□□□ -1.68
O00370 AC114781.5-201ENST00000615297 108 ntBASIC4.53□□□□□ -1.68
O00370 AP000943.4-201ENST00000622912 357 ntBASIC4.53□□□□□ -1.68
O00370 AL356121.2-201ENST00000624715 780 ntBASIC4.53□□□□□ -1.68
O00370 AP000843.1-201ENST00000624880 701 ntBASIC4.53□□□□□ -1.68
O00370 CR392039.4-201ENST00000624968 501 ntBASIC4.53□□□□□ -1.68
O00370 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.53□□□□□ -1.68
O00370 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
O00370 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.53□□□□□ -1.68
O00370 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
O00370 AC016588.2-201ENST00000632484 3021 ntBASIC4.53□□□□□ -1.68
O00370 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.53□□□□□ -1.68
O00370 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
O00370 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
O00370 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.52□□□□□ -1.69
O00370 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.52□□□□□ -1.69
O00370 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
O00370 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
O00370 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.52□□□□□ -1.69
O00370 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
O00370 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
O00370 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
O00370 MTND5P11-201ENST00000511037 1812 ntBASIC4.52□□□□□ -1.69
O00370 RNA5SP366-201ENST00000365454 123 ntBASIC4.52□□□□□ -1.69
O00370 RNU6-481P-201ENST00000384194 107 ntBASIC4.52□□□□□ -1.69
O00370 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.52□□□□□ -1.69
O00370 RNA5SP36-201ENST00000410197 133 ntBASIC4.52□□□□□ -1.69
O00370 RNU4-74P-201ENST00000411280 161 ntBASIC4.52□□□□□ -1.69
O00370 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
O00370 RBMY1KP-201ENST00000423480 476 ntBASIC4.52□□□□□ -1.69
O00370 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.52□□□□□ -1.69
O00370 RPS24P8-201ENST00000431490 402 ntBASIC4.52□□□□□ -1.69
O00370 AL035458.1-201ENST00000433096 585 ntBASIC4.52□□□□□ -1.69
O00370 MTCO1P52-201ENST00000433928 531 ntBASIC4.52□□□□□ -1.69
O00370 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.52□□□□□ -1.69
O00370 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.52□□□□□ -1.69
O00370 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
O00370 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
O00370 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.52□□□□□ -1.69
O00370 RPS20P4-201ENST00000461659 355 ntBASIC4.52□□□□□ -1.69
O00370 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.52□□□□□ -1.69
O00370 AC023050.1-201ENST00000498198 304 ntBASIC4.52□□□□□ -1.69
O00370 OR5H3P-201ENST00000502817 919 ntBASIC4.52□□□□□ -1.69
O00370 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.52□□□□□ -1.69
O00370 AC108145.1-201ENST00000503770 153 ntBASIC4.52□□□□□ -1.69
O00370 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.52□□□□□ -1.69
O00370 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.52□□□□□ -1.69
O00370 AC010374.2-201ENST00000512933 535 ntBASIC4.52□□□□□ -1.69
O00370 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.52□□□□□ -1.69
O00370 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.52□□□□□ -1.69
O00370 DEFB109D-201ENST00000529497 240 ntBASIC4.52□□□□□ -1.69
O00370 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.52□□□□□ -1.69
O00370 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.52□□□□□ -1.69
O00370 AC122134.1-202ENST00000569111 1201 ntBASIC4.52□□□□□ -1.69
O00370 VN1R84P-201ENST00000593697 235 ntBASIC4.52□□□□□ -1.69
O00370 AP003117.1-201ENST00000602771 554 ntBASIC4.52□□□□□ -1.69
O00370 AC144521.1-201ENST00000607148 956 ntBASIC4.52□□□□□ -1.69
O00370 AP005229.2-201ENST00000609980 697 ntBASIC4.52□□□□□ -1.69
O00370 AP003072.4-201ENST00000624580 310 ntBASIC4.52□□□□□ -1.69
O00370 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
O00370 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.52□□□□□ -1.69
O00370 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.52□□□□□ -1.69
O00370 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.52□□□□□ -1.69
O00370 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
O00370 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
O00370 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
O00370 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
O00370 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
O00370 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
O00370 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
O00370 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
O00370 HMGB1P13-201ENST00000406019 642 ntBASIC4.51□□□□□ -1.69
O00370 AL450992.3-201ENST00000413192 568 ntBASIC4.51□□□□□ -1.69
O00370 JKAMPP1-201ENST00000413804 919 ntBASIC4.51□□□□□ -1.69
O00370 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.51□□□□□ -1.69
O00370 RPS23P10-201ENST00000416185 486 ntBASIC4.51□□□□□ -1.69
O00370 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
O00370 MTCO3P4-201ENST00000419236 787 ntBASIC4.51□□□□□ -1.69
O00370 AL512637.2-201ENST00000431287 1256 ntBASIC4.51□□□□□ -1.69
O00370 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.51□□□□□ -1.69
O00370 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.51□□□□□ -1.69
O00370 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.51□□□□□ -1.69
O00370 GSTA7P-201ENST00000438425 448 ntBASIC4.51□□□□□ -1.69
O00370 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.51□□□□□ -1.69
O00370 RPL34P26-201ENST00000445636 354 ntBASIC4.51□□□□□ -1.69
O00370 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.51□□□□□ -1.69
O00370 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
O00370 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.51□□□□□ -1.69
O00370 AC009963.2-201ENST00000453431 138 ntBASIC4.51□□□□□ -1.69
O00370 AC133473.1-201ENST00000455173 299 ntBASIC4.51□□□□□ -1.69
O00370 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.51□□□□□ -1.69
O00370 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms