Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.1□□□□□ -1.75
SLC28A1O00337 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
SLC28A1O00337 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC28A1O00337 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SLC28A1O00337 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SLC28A1O00337 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SLC28A1O00337 AL139811.1-201ENST00000424779 2299 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC28A1O00337 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SLC28A1O00337 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC28A1O00337 Z82217.1-201ENST00000625157 8149 ntBASIC4.1□□□□□ -1.75
SLC28A1O00337 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC28A1O00337 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SLC28A1O00337 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.09□□□□□ -1.75
SLC28A1O00337 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.09□□□□□ -1.75
SLC28A1O00337 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
SLC28A1O00337 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SLC28A1O00337 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
SLC28A1O00337 RNA5SP502-201ENST00000362694 119 ntBASIC4.09□□□□□ -1.75
SLC28A1O00337 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SLC28A1O00337 AL133270.1-201ENST00000402635 279 ntBASIC4.09□□□□□ -1.75
SLC28A1O00337 PRELID3BP11-201ENST00000414230 479 ntBASIC4.09□□□□□ -1.75
SLC28A1O00337 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SLC28A1O00337 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SLC28A1O00337 UBE2V1P6-201ENST00000430840 422 ntBASIC4.09□□□□□ -1.75
SLC28A1O00337 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.09□□□□□ -1.75
SLC28A1O00337 RPL37P1-201ENST00000432310 284 ntBASIC4.09□□□□□ -1.75
SLC28A1O00337 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.09□□□□□ -1.75
SLC28A1O00337 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC28A1O00337 AL158053.1-201ENST00000441503 453 ntBASIC4.09□□□□□ -1.75
SLC28A1O00337 HMGB1P48-201ENST00000446155 598 ntBASIC4.09□□□□□ -1.75
SLC28A1O00337 PHBP16-201ENST00000446318 950 ntBASIC4.09□□□□□ -1.75
SLC28A1O00337 AL096803.2-201ENST00000450032 677 ntBASIC4.09□□□□□ -1.75
SLC28A1O00337 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.09□□□□□ -1.75
SLC28A1O00337 RN7SL826P-201ENST00000479724 288 ntBASIC4.09□□□□□ -1.75
SLC28A1O00337 HMGB1P21-201ENST00000502313 581 ntBASIC4.09□□□□□ -1.75
SLC28A1O00337 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.09□□□□□ -1.75
SLC28A1O00337 AC106806.2-201ENST00000509365 500 ntBASIC4.09□□□□□ -1.75
SLC28A1O00337 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SLC28A1O00337 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.09□□□□□ -1.75
SLC28A1O00337 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.09□□□□□ -1.75
SLC28A1O00337 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC28A1O00337 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC28A1O00337 AC011611.5-201ENST00000552477 578 ntBASIC4.09□□□□□ -1.75
SLC28A1O00337 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.09□□□□□ -1.75
SLC28A1O00337 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.09□□□□□ -1.75
SLC28A1O00337 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.09□□□□□ -1.75
SLC28A1O00337 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.09□□□□□ -1.75
SLC28A1O00337 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.09□□□□□ -1.75
SLC28A1O00337 AL021707.7-201ENST00000607991 416 ntBASIC4.09□□□□□ -1.75
SLC28A1O00337 AP005229.2-201ENST00000609980 697 ntBASIC4.09□□□□□ -1.75
SLC28A1O00337 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.09□□□□□ -1.75
SLC28A1O00337 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.09□□□□□ -1.75
SLC28A1O00337 AC140479.6-201ENST00000633535 357 ntBASIC4.09□□□□□ -1.75
SLC28A1O00337 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SLC28A1O00337 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SLC28A1O00337 ASNSP1-204ENST00000641977 1664 ntBASIC4.09□□□□□ -1.76
SLC28A1O00337 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SLC28A1O00337 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SLC28A1O00337 AL512646.1-201ENST00000269395 1077 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 AC079741.1-201ENST00000321498 212 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC28A1O00337 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.08□□□□□ -1.76
SLC28A1O00337 MIR525-201ENST00000384978 85 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SLC28A1O00337 RPS3AP23-201ENST00000401762 784 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC28A1O00337 RPEP3-201ENST00000425462 676 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC28A1O00337 AL157831.1-201ENST00000426134 473 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.08□□□□□ -1.76
SLC28A1O00337 RPL7P4-203ENST00000430239 730 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC28A1O00337 AC006994.1-201ENST00000438212 839 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 AP000949.1-201ENST00000438328 629 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC28A1O00337 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC28A1O00337 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SLC28A1O00337 GTF2IP12-201ENST00000456547 356 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SLC28A1O00337 RNA5SP73-201ENST00000516744 108 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC28A1O00337 MTND1P36-201ENST00000522384 936 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 HMGB1P1-201ENST00000522557 636 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC28A1O00337 AP006289.1-201ENST00000538089 277 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 AC092451.2-201ENST00000538746 658 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC28A1O00337 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC28A1O00337 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC28A1O00337 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC28A1O00337 AC068790.5-201ENST00000602741 355 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 AC064801.1-201ENST00000612025 407 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SLC28A1O00337 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SLC28A1O00337 MIR6715B-201ENST00000637172 77 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 AC008013.2-202ENST00000637965 364 ntBASIC4.08□□□□□ -1.76
SLC28A1O00337 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SLC28A1O00337 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms