Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 HMGB3P21-201ENST00000452483 547 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 RPL23AP14-201ENST00000468281 468 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 RN7SL330P-201ENST00000469709 307 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.09□□□□□ -1.75
PDLIM1O00151 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.09□□□□□ -1.75
PDLIM1O00151 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.09□□□□□ -1.75
PDLIM1O00151 MTND4LP2-201ENST00000502312 285 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.09□□□□□ -1.75
PDLIM1O00151 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.09□□□□□ -1.75
PDLIM1O00151 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.09□□□□□ -1.75
PDLIM1O00151 AC007016.1-201ENST00000512110 244 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.09□□□□□ -1.75
PDLIM1O00151 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.09□□□□□ -1.75
PDLIM1O00151 AP003049.1-201ENST00000529418 457 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.09□□□□□ -1.75
PDLIM1O00151 MIR4330-201ENST00000579077 105 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 AC011477.5-201ENST00000586571 259 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 VN1R84P-201ENST00000593697 235 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.09□□□□□ -1.75
PDLIM1O00151 AP003392.5-201ENST00000607857 415 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 MIR6820-201ENST00000611508 62 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.09□□□□□ -1.75
PDLIM1O00151 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.09□□□□□ -1.75
PDLIM1O00151 AC006065.6-201ENST00000625201 545 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.09□□□□□ -1.75
PDLIM1O00151 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PDLIM1O00151 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PDLIM1O00151 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PDLIM1O00151 AL512283.1-201ENST00000606756 1384 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.09□□□□□ -1.76
PDLIM1O00151 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PDLIM1O00151 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
PDLIM1O00151 ZNF137P-201ENST00000456718 1920 ntBASIC4.09□□□□□ -1.76
PDLIM1O00151 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PDLIM1O00151 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PDLIM1O00151 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDLIM1O00151 SNORD66.1-201ENST00000391230 76 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.08□□□□□ -1.76
PDLIM1O00151 SDHCP2-201ENST00000398565 501 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 RPS3AP23-201ENST00000401762 784 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 RPS4XP9-201ENST00000405151 780 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
PDLIM1O00151 AC245028.1-201ENST00000423259 256 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 RPS12P10-201ENST00000427031 377 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 AC011742.1-201ENST00000431448 434 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.08□□□□□ -1.76
PDLIM1O00151 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.08□□□□□ -1.76
PDLIM1O00151 UBE2V1P3-201ENST00000439651 417 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.08□□□□□ -1.76
PDLIM1O00151 RPS20P4-201ENST00000461659 355 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.08□□□□□ -1.76
PDLIM1O00151 AC006511.1-201ENST00000470614 315 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 AC027338.1-201ENST00000514840 825 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.08□□□□□ -1.76
PDLIM1O00151 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.08□□□□□ -1.76
PDLIM1O00151 OR5AN2P-201ENST00000534535 896 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.08□□□□□ -1.76
PDLIM1O00151 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.08□□□□□ -1.76
PDLIM1O00151 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.08□□□□□ -1.76
PDLIM1O00151 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.08□□□□□ -1.76
PDLIM1O00151 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.08□□□□□ -1.76
PDLIM1O00151 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.08□□□□□ -1.76
PDLIM1O00151 AC083899.3-201ENST00000603413 594 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 AL049634.3-201ENST00000604968 457 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.08□□□□□ -1.76
PDLIM1O00151 AC008121.2-201ENST00000614647 523 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 AC108467.2-201ENST00000617640 1597 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 AC138907.10-201ENST00000623708 983 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 AC015726.3-201ENST00000624501 418 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 AC024023.1-201ENST00000624530 922 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 OR2L1P-202ENST00000641567 1023 ntBASIC4.08□□□□□ -1.76
PDLIM1O00151 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDLIM1O00151 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PDLIM1O00151 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.08□□□□□ -1.76
PDLIM1O00151 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.07□□□□□ -1.76
PDLIM1O00151 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PDLIM1O00151 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.07□□□□□ -1.76
PDLIM1O00151 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
PDLIM1O00151 RAD17P1-201ENST00000418130 2042 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 AL132640.2-201ENST00000559968 1698 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PDLIM1O00151 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDLIM1O00151 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PDLIM1O00151 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDLIM1O00151 AC021146.4-201ENST00000309229 279 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDLIM1O00151 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 MTCO3P31-201ENST00000405526 789 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 PTGES3P2-201ENST00000407942 482 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.07□□□□□ -1.76
PDLIM1O00151 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.07□□□□□ -1.76
PDLIM1O00151 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.07□□□□□ -1.76
PDLIM1O00151 RPS27P5-201ENST00000444247 244 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 AC069540.1-201ENST00000446320 988 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 RPL7P31-201ENST00000450192 724 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.07□□□□□ -1.76
PDLIM1O00151 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PDLIM1O00151 CEACAMP4-201ENST00000457676 421 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms