Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL450992.3-201ENST00000413192 568 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL356535.1-201ENST00000440335 398 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 XKRYP6-201ENST00000440468 1116 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 XKRYP3-201ENST00000442113 1116 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 RPS4XP4-201ENST00000443195 763 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 RN7SL271P-201ENST00000487601 295 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC069499.1-201ENST00000489433 509 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC068446.3-201ENST00000555285 382 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC027176.2-201ENST00000559166 746 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC079171.1-201ENST00000568788 914 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 HNRNPCP4-201ENST00000571636 900 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC245128.3-201ENST00000594721 748 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 VN1R81P-201ENST00000602085 372 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC015722.2-201ENST00000622210 551 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 NOL8P1-201ENST00000508336 3529 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 CR382285.2-201ENST00000624662 1495 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TMX2-CTNND1H3BSU7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 ZNF602P-201ENST00000405929 924 ntBASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 RPL7P28-201ENST00000437739 740 ntBASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 RAB9AP5-201ENST00000437794 597 ntBASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 RAB9AP2-201ENST00000443911 597 ntBASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 OR9M1P-201ENST00000459641 921 ntBASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 VTA1P2-201ENST00000520205 911 ntBASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC007599.1-201ENST00000568688 1174 ntBASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC015922.4-201ENST00000612568 690 ntBASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL118556.2-201ENST00000614375 824 ntBASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL139089.1-201ENST00000620372 975 ntBASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC112200.1-201ENST00000625015 234 ntBASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC095050.2-201ENST00000510748 1458 ntBASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.89□□□□□ -1.79
TMX2-CTNND1H3BSU7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 RNU6-891P-201ENST00000384280 111 ntBASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 SNORA3.3-201ENST00000408712 125 ntBASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 MTATP6P19-201ENST00000413797 659 ntBASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC093698.1-201ENST00000423843 571 ntBASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL500522.2-201ENST00000448562 343 ntBASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 EIF4A1P11-201ENST00000451239 222 ntBASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 RPL31P61-201ENST00000496160 376 ntBASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms