Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RGPD3A6NKT7 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RGPD3A6NKT7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RGPD3A6NKT7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RGPD3A6NKT7 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RGPD3A6NKT7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RGPD3A6NKT7 LIPT1P1-201ENST00000415870 1186 ntBASIC4.64□□□□□ -1.67
RGPD3A6NKT7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.64□□□□□ -1.67
RGPD3A6NKT7 VN1R25P-201ENST00000443385 738 ntBASIC4.64□□□□□ -1.67
RGPD3A6NKT7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.64□□□□□ -1.67
RGPD3A6NKT7 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.64□□□□□ -1.67
RGPD3A6NKT7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.64□□□□□ -1.67
RGPD3A6NKT7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.64□□□□□ -1.67
RGPD3A6NKT7 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.64□□□□□ -1.67
RGPD3A6NKT7 MIR6715A-201ENST00000615929 79 ntBASIC4.64□□□□□ -1.67
RGPD3A6NKT7 AC138627.1-204ENST00000641894 765 ntBASIC4.64□□□□□ -1.67
RGPD3A6NKT7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RGPD3A6NKT7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
RGPD3A6NKT7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RGPD3A6NKT7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
RGPD3A6NKT7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RGPD3A6NKT7 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RGPD3A6NKT7 IL6STP1-201ENST00000346911 1020 ntBASIC4.63□□□□□ -1.67
RGPD3A6NKT7 CCRL1P1-201ENST00000449542 1053 ntBASIC4.63□□□□□ -1.67
RGPD3A6NKT7 RPL5P30-201ENST00000465511 891 ntBASIC4.63□□□□□ -1.67
RGPD3A6NKT7 KC877373.1-201ENST00000479066 408 ntBASIC4.63□□□□□ -1.67
RGPD3A6NKT7 AC011825.1-201ENST00000484967 388 ntBASIC4.63□□□□□ -1.67
RGPD3A6NKT7 AC108941.1-201ENST00000502853 530 ntBASIC4.63□□□□□ -1.67
RGPD3A6NKT7 HIGD1AP3-201ENST00000515857 278 ntBASIC4.63□□□□□ -1.67
RGPD3A6NKT7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.63□□□□□ -1.67
RGPD3A6NKT7 AC026422.1-201ENST00000623961 452 ntBASIC4.63□□□□□ -1.67
RGPD3A6NKT7 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.63□□□□□ -1.67
RGPD3A6NKT7 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
RGPD3A6NKT7 RNU1-15P-201ENST00000353977 144 ntBASIC4.63□□□□□ -1.67
RGPD3A6NKT7 AC093719.1-202ENST00000392735 373 ntBASIC4.63□□□□□ -1.67
RGPD3A6NKT7 RNA5SP306-201ENST00000411087 107 ntBASIC4.63□□□□□ -1.67
RGPD3A6NKT7 AC008065.1-201ENST00000428525 348 ntBASIC4.63□□□□□ -1.67
RGPD3A6NKT7 HSPE1P27-201ENST00000430808 296 ntBASIC4.63□□□□□ -1.67
RGPD3A6NKT7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.63□□□□□ -1.67
RGPD3A6NKT7 AC022795.1-201ENST00000473808 480 ntBASIC4.63□□□□□ -1.67
RGPD3A6NKT7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.63□□□□□ -1.67
RGPD3A6NKT7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.63□□□□□ -1.67
RGPD3A6NKT7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.63□□□□□ -1.67
RGPD3A6NKT7 UBTFL9-201ENST00000534504 1148 ntBASIC4.63□□□□□ -1.67
RGPD3A6NKT7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.63□□□□□ -1.67
RGPD3A6NKT7 AL773545.4-201ENST00000637262 310 ntBASIC4.63□□□□□ -1.67
RGPD3A6NKT7 AL513478.4-201ENST00000641636 310 ntBASIC4.63□□□□□ -1.67
RGPD3A6NKT7 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 AC027290.2-201ENST00000623210 18662 ntBASIC4.62□□□□□ -1.67
RGPD3A6NKT7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 VDAC2P1-201ENST00000399358 958 ntBASIC4.62□□□□□ -1.67
RGPD3A6NKT7 AL357075.1-201ENST00000404107 726 ntBASIC4.62□□□□□ -1.67
RGPD3A6NKT7 AC107083.1-201ENST00000439643 279 ntBASIC4.62□□□□□ -1.67
RGPD3A6NKT7 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 AC023141.12-201ENST00000512399 199 ntBASIC4.62□□□□□ -1.67
RGPD3A6NKT7 MTND6P33-201ENST00000571794 183 ntBASIC4.62□□□□□ -1.67
RGPD3A6NKT7 MIR4276-201ENST00000584832 70 ntBASIC4.62□□□□□ -1.67
RGPD3A6NKT7 AC084036.1-201ENST00000609190 508 ntBASIC4.62□□□□□ -1.67
RGPD3A6NKT7 AL162274.2-201ENST00000614406 332 ntBASIC4.62□□□□□ -1.67
RGPD3A6NKT7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.62□□□□□ -1.67
RGPD3A6NKT7 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
RGPD3A6NKT7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RGPD3A6NKT7 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RGPD3A6NKT7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RGPD3A6NKT7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RGPD3A6NKT7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RGPD3A6NKT7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
RGPD3A6NKT7 GSTA8P-201ENST00000404253 637 ntBASIC4.61□□□□□ -1.67
RGPD3A6NKT7 OR51A6P-201ENST00000418680 1004 ntBASIC4.61□□□□□ -1.67
RGPD3A6NKT7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.61□□□□□ -1.67
RGPD3A6NKT7 AC233982.1-201ENST00000451247 436 ntBASIC4.61□□□□□ -1.67
RGPD3A6NKT7 RPL31P61-201ENST00000496160 376 ntBASIC4.61□□□□□ -1.67
RGPD3A6NKT7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.61□□□□□ -1.67
RGPD3A6NKT7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.61□□□□□ -1.67
RGPD3A6NKT7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.61□□□□□ -1.67
RGPD3A6NKT7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.61□□□□□ -1.67
RGPD3A6NKT7 AL359757.2-201ENST00000624309 274 ntBASIC4.61□□□□□ -1.67
RGPD3A6NKT7 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
RGPD3A6NKT7 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RGPD3A6NKT7 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms