Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 HMGB1P32-201ENST00000425971 565 ntBASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 RSL24D1P6-201ENST00000426934 401 ntBASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 AC006989.1-201ENST00000427212 131 ntBASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 RPS26P40-201ENST00000435209 294 ntBASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 AC074367.1-201ENST00000438685 1125 ntBASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 AC010655.1-201ENST00000449336 292 ntBASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 S100A11P1-201ENST00000477525 312 ntBASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 AC093853.1-201ENST00000515689 483 ntBASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 CYP2C60P-201ENST00000566088 139 ntBASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 RN7SL703P-201ENST00000578485 302 ntBASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 SNORD39.2-201ENST00000579995 76 ntBASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 AC053481.4-201ENST00000583164 216 ntBASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 AC105105.5-201ENST00000622635 1294 ntBASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAV27A0A087WT01 CYP1D1P-201ENST00000416662 1433 ntBASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 RPS4XP5-202ENST00000449995 1334 ntBASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 AL592437.2-201ENST00000421655 2434 ntBASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 RNA5SP42-201ENST00000364278 115 ntBASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 RNA5SP235-201ENST00000365411 114 ntBASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 RPL7P60-201ENST00000397636 735 ntBASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 AL136116.1-201ENST00000403591 381 ntBASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 MTHFD2P2-201ENST00000407725 247 ntBASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 RPL30P2-201ENST00000414021 291 ntBASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 AC016769.2-201ENST00000414815 475 ntBASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 COX6CP17-201ENST00000421389 185 ntBASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 TPT1P12-201ENST00000448968 492 ntBASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 MIR2116-201ENST00000517221 80 ntBASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 AC018552.3-201ENST00000567416 561 ntBASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 AL732618.1-201ENST00000623251 301 ntBASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRAV27A0A087WT01 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
TRAV27A0A087WT01 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 AL445437.1-201ENST00000623157 3087 ntBASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 PPIAP31-201ENST00000405422 495 ntBASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 AMD1P2-201ENST00000412936 992 ntBASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 CYP4F29P-201ENST00000420685 446 ntBASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 RPS29P7-201ENST00000439662 171 ntBASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 AL035551.1-201ENST00000446931 348 ntBASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 ANP32BP2-201ENST00000454525 545 ntBASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 AC084357.1-201ENST00000473404 255 ntBASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 GAPDHP36-201ENST00000480688 918 ntBASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 RPL23AP73-201ENST00000492507 471 ntBASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 HMGB3P14-201ENST00000494195 599 ntBASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 IGHV3-32-201ENST00000519182 355 ntBASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 MIR4286-201ENST00000580651 93 ntBASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 AC006077.1-201ENST00000604746 343 ntBASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 RNU1-30P-201ENST00000606575 163 ntBASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 252.1 ms